Glycine soja (wild soybean): 114368297
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Entry
114368297 CDS
T06057
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114368297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114368297
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114368297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
114368297
NCBI-ProteinID:
XP_028181414
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All DBs
Position
1:57181854..57201939
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AA seq
890 aa
AA seq
DB search
MEEEEDEVGWCSSDSGDGDGDDDIEERKSQNVDALLRGNLVVKRQSLLPRLLSVSQGAAV
CRKPFKPPCSKSHASASAYNQDLTRKLSARKRFVPWGSSSPIPIPIPRSALDDSKFNVAV
AVADVAEELKPSLPPGIDPLVLWHPQDSEDANANFTTITVDPLLVRYLRPHQREGVQFMF
DCVSGLSTTPNIHGCILADDMGLGKTLQSITLLYTLLSQGFDGKPMVRKAIIVTPTSLVS
NWEAEIKKWVGERVPLVALCESTREDVISGIDNFTSPKSNLQVLIVSYETFRMHSSKFSS
TDSCDLLICDEAHRLKNDQTITNRALAALPCKRRILLSGTPLQNDLEEFFAMVNFTNPGI
LGDIAHFRRYYEAPIICGREPAATAEEKKLGAEQSAELSVNVNRFILRRTNALLSNHLPP
KIVEVVCCKLTPLQSELYKHFIQSKNVKRAITEELKQSKILAYITALKKLCNHPKLIYDT
IRSGSPGTSGFEDCIRFFPPEMLSGRSGSWTGGHGAWVELSGKMHVLARLLAHLRQRTND
RIVLVSNYTQTLDLFAQLCRERRYPHLRLDGSTSISKRQKLVNCFNDPSKDEFVFLLSSK
AGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQR
QMSKEGLQKVIQQEQTDSLVAQGNLLSTENLRDLFTFHENIKSEIHENMQCSRCQTFDGP
RSTEAQSTITDSESDEETSDIGGFAEIAGCLQNLKRSEKQVGSPLEEDLGSWGHHFFPTS
VPDAILQASAGDEVTFVFTNQVNGRLVPVESIMSPKLQQKDPKKELLKSKQNGKQKPTPF
SLHNRLPLQSASVGITKNISMNVAFKPQYSLVSKVLPQKRSCPANINDDN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaagatgaagtgggttggtgttcttctgattcgggcgacggcgacggc
gacgacgatatcgaagaacggaaatctcagaatgtggatgccttgctcaggggcaacctc
gtggtgaagagacaatcgttgctaccgcgacttctatcagtatcgcaaggagcggctgtt
tgtagaaagcccttcaaacctccatgctctaaatctcatgcttccgcttccgcttacaat
caagaccttactcgtaagctttccgctcgcaaaaggtttgttccctggggttcttcctct
cctattcctattcctattcctagatctgccttagacgactccaaattcaatgttgctgtt
gctgttgctgatgttgccgaggagctcaagccctctttgcctcccgggattgatcctctc
gtattgtggcaccctcaagactccgaggatgctaatgctaattttaccaccataacagtt
gatccgttgcttgttcgttaccttcgtccacatcagagagaaggggttcagttcatgttt
gattgtgtctcaggcctgtctaccacaccaaatatacacggatgcattttggcagatgat
atgggtttggggaagacattgcagtccatcacattactatatactctactttctcaaggg
tttgatggcaaaccaatggttcgaaaggccatcattgtgactcctaccagccttgtcagc
aattgggaagctgaaatcaaaaagtgggttggagaaagagttcctcttgttgctttatgt
gaaagcacaagggaagatgtcatctccgggattgacaattttacaagtcccaaaagcaat
ttacaggtgctcattgtttcatatgagacatttcgaatgcattcgtcaaagtttagctct
actgactcatgtgaccttctcatatgtgatgaggctcacagactgaaaaatgatcagacg
ataacaaaccgggcattggcagctctcccctgcaaacgtagaattttgttgtcaggaact
cccttgcaaaatgacttagaagaattctttgcaatggttaactttactaatcctggaata
ttgggtgatattgcacattttcgacgttactatgaggcaccaattatttgtggaagagaa
cctgctgccactgcggaagagaagaagctaggtgctgaacagtctgctgaattaagtgtc
aatgttaaccggttcatattaagaaggactaatgcattgttatcaaatcacttaccacct
aagatagttgaagttgtttgctgcaagttgactccactgcagtcagaactatataaacat
tttatacaatccaaaaatgttaagcgggcaattactgaagaactgaagcaatcaaagatt
ttggcctacataacagctctcaaaaagttgtgcaatcatccaaagcttatctatgatacc
atacgaagtgggagtccaggaacttcaggttttgaggactgtatccgattcttccctcct
gaaatgttatctggaaggtctggctcatggacgggagggcatggagcatgggttgagcta
tcagggaaaatgcatgtcttagcaagattacttgctcatttacgtcagagaacaaatgac
cgcattgtccttgtctcaaactacactcagactcttgatctttttgctcaattgtgtcgg
gaacgaaggtaccctcacttgaggcttgacggctctacatcaatcagtaaaaggcagaag
ttggtcaactgctttaatgatccatccaaggacgaatttgtttttctcttaagcagcaag
gctggtggttgtggactcaatttgattggtggaaatcgacttgtcttgttcgatcctgat
tggaatccagcaaatgataaacaagctgcagcaagagtatggagggatggacagaagaaa
agagtttatatttatagatttttgagtgccggaacaatagaagaaaaggtctaccagcgt
cagatgtcaaaagaagggctgcaaaaggtcattcagcaggagcaaaccgatagccttgtg
gcacagggtaacttgctttcaacagagaatcttcgtgatttgtttacttttcatgagaac
atcaagtcagagattcatgaaaacatgcaatgcagtcggtgtcaaacatttgatggccct
cgaagcactgaagcccagtcaacaataacagatagtgaatctgatgaagaaacctctgat
attggtggatttgcagaaattgctggctgcttacagaatttaaaaagatcagaaaagcag
gtagggagcccattggaagaggatttaggaagttggggccatcattttttcccaacttct
gtaccagatgctatacttcaggcttcagccggtgatgaggtgacttttgtcttcacaaac
caagttaacggacgactggtacccgttgaatctattatgagtcccaagctacagcaaaag
gatccaaaaaaggaattactcaagtcaaagcagaacggtaaacaaaagcccactcctttt
tctttacataacagactaccattgcagtctgcttctgtcgggattactaaaaacatctcc
atgaatgtggcatttaagccccagtactctcttgtaagtaaagtattgccacagaaaaga
tcatgtcctgctaatatcaatgatgataattga
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