Glycine soja (wild soybean): 114368373
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Entry
114368373 CDS
T06057
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1-like
KO
K28108
shortage in chiasmata 1
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114368373
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114368373
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
114368373
NCBI-ProteinID:
XP_028181480
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Position
9:complement(32994604..33008824)
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AA seq
1598 aa
AA seq
DB search
MRTRFLNNDYFALPPPQTFPFLHLPVPRLLPPPPYAVYHHLRFGPPIPLSLHLDPFPVDA
VLSTFLSAVLPHRIHTAPSNPPQEAEVIFEECVSEVDIKFSNESKTIALNDKNDDVYEAI
QFETPELDAFLENVYVTETERMQMLSQTSEVENSLDMLKPEPSRQYPYEALESVSLVEDV
ISEYLMGGNAYSLEDNISVHHQPHSDKNKFLILEVDEETLGIPTRFSLVEIVDSYFENIR
SQNFDELYQSVIEGKELLGSMKHNMMEFFSDECVSKKSLELSDLFPERDFMNLLETELVD
RNIGLQRTWHANSDLILNLVTFQEFAFLDKDLMQTFEAFYDTKASDDLVTYEWMFKKEFN
FKSFDELIVSNEIALTDDTFKSLPVPVIYDHIKMITLHDIIVEQFSSLKTRPLSASDGIY
LNWDLLEEDKCNCKISNWYQNILAKIDLNNQDFGGTSFDDGKLVFDLVFCDDTIDECDIK
QNEELKKLLSDCMPLLDNHPVEVASGKILEHVSSKQESQEQLPERKERASLLFKSMSEIS
NLDYFLNPQKATDKGNCNYTVESSNVNVSIPKVSSNESKVGTQSQGFHTVLHRVKLSNNI
VTLAGYFEKSYLAILHSDTEMTKMHNSDADYLKLLGLQKHKLIEYHINGNQMAFVVLCAI
KQAAWYLCFYGLHPAFFYLDKLCQNLEYLKSKLGFLQSLIKDEKGKVDNNVTMAHPSLTI
VKEILQSYIKQNSLKTLIVAEEVFWYSLKNLLLSLGLSFIALNDSCRNQPCANTVSEDTD
TKMKELLISDCLLVSHKHVSPLFPLNKFDIILEYGGSYDSSRISKLSQNLVGLPHLHFLR
VELDGHAALKALCEGVEMLPNIEMSMGSETHLIFNHKVSMMNQNLERLLNFCPVEQSYDK
KSSKVAPEADNHMPLVPAVKTEHGHKSMEVFPGTVMIVNTQNVDKEMIMSRRSSYLVILA
MEKEGIQVVERDLDLPVDIILSSAICLAWYDSRNLGKKSTPATEASSSLPLCIENIATDV
LTLLSFYFRGCFLVFEGELNFLSTVMESSDGLYAAATSLGIDLQIFFSYSPELTNEVIVS
CIKSANNMNRGLYPKMPDSVTLAESFLTEFPGINPLTAHSILSSGVKLNEFLVWSHEQRM
HVLEKYHVPDESISLFSVFCRYGEREDSKSIMTDCSSSVSSGLDSDWCCLYQVENERKRK
NPISSHQIDELCLDELLQFETLNQVVEAAPDSSTLPKPFDFVMSKNAGRSSDLANASLSM
SEFFGQKQSTGAATMRNLSGVSYSAGNCKAPNKSEQLKQPSLSLKNKELAQNEILGTALM
GKGVNWHNFSNSKKLHEDIRGEVVDLTDSPLFDKRFAIPDSMYFTSLMAEKEKDLMRTNK
IARKLSFDNSSHPETNSSKIWRSLKDKRGEVDNYPEPDFREDIFPLDFKPRENIGFTQAS
MRNLEESPFKEELSHLGETPFSYARQSASILKNSPWTIEFINKVKEKSRLRQKSLSSENS
GPYFGYPGSMSKTSKRRSPSVIDLFKNQPNRTSGNVPKQKRQKRSGPSSNSVKKARDSTS
SCTPCDKKSTKTLTFGRYGSGGQTRLVWSDKKDLCQAQ
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgctttctcaacaatgactacttcgctctccctccacctcaaaccttcccc
ttcctccacctccccgtccctcgcctccttccgccgccgccatacgccgtctaccaccac
ctccgctttggtcctccgatccccctctccctccacctcgaccccttccccgttgacgcc
gtgctctccaccttcctctccgccgtcctacctcaccgaatccacacagctccgtcgaat
cccccgcaagaggcggaggttatcttcgaagaatgtgtctccgaagttgatatcaaattt
tcgaatgagagtaaaactattgctctcaatgataagaacgatgatgtttatgaggcgatt
caattcgaaacaccagagcttgacgcgttcttggaaaatgtttatgtcactgagacggag
aggatgcaaatgctgtctcaaacttcagaagttgaaaatagcctggacatgctcaagcct
gaaccatcaaggcaatacccgtatgaggctctggaatcagtatctttggtagaagatgta
atttcagagtacttgatggggggaaatgcatattctctagaagataatatttctgttcat
caccagccacactctgataaaaacaaattccttattttggaagtggatgaggaaactttg
ggaattcccacgcgcttctctttggtagaaattgttgactcatattttgaaaatatcaga
tctcaaaattttgatgaactatatcaatctgtaatagagggcaaggagcttttgggttct
atgaagcataacatgatggagtttttctcagatgagtgtgtatcaaagaagagtctggag
ttatctgatctgtttcctgaaagggattttatgaatttgctggaaactgaacttgttgat
aggaatattggcctgcaaaggacatggcatgctaacagtgatttgatactgaatcttgtt
accttccaagagtttgcgttccttgacaaagacttaatgcaaacctttgaagctttctat
gacacaaaagcttcagatgatctagtaacatacgagtggatgtttaagaaagagtttaac
ttcaagagttttgatgaattgattgttagtaatgagatagcactaacagatgacacgttc
aaatcactgcctgtacctgttatctatgatcacataaagatgataactctacatgacatc
atcgtagaacaattttccagcttgaagacccgacctctctctgcctctgatgggatttac
ttaaactgggatctacttgaagaagataagtgcaattgcaaaatctctaactggtatcag
aacatattggccaagatagatctgaacaaccaagattttggaggaacatcttttgatgat
ggaaaattggtatttgatctagttttctgtgatgataccatagatgaatgtgacattaaa
caaaatgaagagttgaagaagttgctttctgattgcatgcctctacttgataatcatcct
gtagaagttgcttcaggaaaaattttagaacatgtatcttctaaacaagaaagtcaagaa
caattacctgaaagaaaggagagggcttcattgttatttaaatctatgtcagaaatcagc
aatcttgattatttcttaaaccctcaaaaagcgactgataaggggaattgtaattataca
gtagagtccagtaatgttaatgttagtattccaaaagtttcatccaatgaatcgaaggtt
ggtacacagtcacaaggattccatactgttctgcatagagttaagttgtccaataatatt
gtgacccttgctggatattttgaaaaaagctatctagccattttgcacagtgatacagag
atgacaaaaatgcataactcggatgcagattatttaaaattgttgggtcttcaaaagcac
aagctgattgaataccatataaatggaaaccaaatggcatttgtcgtgttatgtgctatt
aaacaggctgcttggtacttgtgtttctatggtctccatccagcattcttttatttagac
aaattatgtcaaaacttggagtatttgaaatcaaagttaggcttcctccaatctttgatc
aaagatgaaaaggggaaggtggacaacaatgttactatggcacacccgtcattaacaatt
gtcaaggagattttacaatcatacatcaaacagaatagtttgaaaactttgattgtggcg
gaagaagtattttggtattcattgaaaaatctcctcctttccctggggttatcattcatt
gcactaaatgattcttgtagaaatcagccatgtgccaatactgtgtctgaggacacagat
actaaaatgaaagaacttctgatttcagactgcttgttggtttcacacaagcatgtttct
cccttgtttccattgaacaaatttgacattatcttggaatatggaggttcatatgactca
tctaggatatctaagctttcacaaaacttggttggattgcctcatcttcactttttgagg
gttgaattggatggccatgctgctctcaaagcactctgcgaaggtgttgaaatgctccca
aacattgaaatgtcaatgggaagtgagactcatcttattttcaatcataaggtaagtatg
atgaaccagaacttggagagactactgaacttttgtcctgtggagcaaagctatgataaa
aaatcttccaaggttgcacctgaagcagataatcacatgccgctagttcctgctgtgaaa
actgagcatggccataaaagcatggaagtttttcctggaacagttatgatcgtaaatact
caaaatgtagataaggaaatgataatgtctagaagaagctcttacctggtaattcttgct
atggagaaagaaggaattcaagttgttgaacgtgatttagatttgcctgtggatattata
ttaagttctgctatttgcttggcatggtatgatagtagaaacctcgggaagaaatcaact
ccagcgactgaagcgtcctcaagcttgcctttatgtattgagaatattgccacagatgtt
ctgacattgcttagtttttacttccgtggttgctttctggtgtttgaaggagagcttaac
tttctttcaactgtaatggaatcctcagatggactttatgctgcagcaacaagcctagga
attgatttgcagatattcttctcttactcacctgagttgacaaatgaagttattgtaagc
tgcattaagagtgctaacaatatgaataggggtctgtatcctaaaatgcctgactcagtg
actcttgccgagtcatttcttacagaatttcctggaataaatcctttaactgcacactct
atactatcttcaggggtcaagcttaatgagtttcttgtgtggtcacatgagcaaaggatg
catgttttagaaaagtatcatgtcccagacgaaagtatttctctattcagtgttttctgc
agatatggggaacgggaggactcaaaatccataatgacagattgctcctcttcagtatct
tctggtctggactcagattggtgttgtttatatcaagttgaaaatgaaagaaaaaggaaa
aatcctataagtagtcatcagatagatgaactatgtttggatgaattgttgcaatttgag
acattaaatcaagtagttgaggctgcgccggattcctctaccttgccaaaaccttttgat
tttgttatgtcaaaaaatgctggaagatccagtgacttagcaaacgcaagtttgtccatg
agtgagtttttcggtcaaaagcaaagcaccggtgcagctacaatgagaaacctttctgga
gtctcttattcagcagggaactgcaaagctcccaacaaatcagagcaactgaaacaaccc
agtttatccttgaaaaataaagagttggctcaaaatgaaatactgggtactgctttgatg
ggcaaaggtgtgaattggcataactttagtaattcaaagaagctgcatgaagacattaga
ggtgaggtggtggacttgactgatagccccttatttgataaacgctttgccattcctgat
tccatgtatttcacaagtttgatggcagagaaagagaaagatctgatgagaacgaataaa
attgcaaggaaattgtcatttgataatagtagtcacccagaaaccaactcatcaaaaata
tggagatccttaaaagacaaacggggagaagttgacaactaccctgaaccagattttcga
gaagatatatttcctcttgatttcaagccccgtgaaaacattggctttactcaggcatcg
atgagaaacttagaagaatcaccattcaaggaggaactgtcacatttgggagaaactcca
ttctcatatgcccgccagtctgctagtatattaaagaattcaccttggacgattgagttt
attaataaagtaaaagaaaagagcagattgcgtcaaaaatcattatcaagtgagaactct
ggcccttattttgggtaccccgggagcatgtccaaaacttctaagcgaagaagtccttcc
gtaattgatttgtttaagaaccaacctaatagaacatctggaaatgttccgaaacagaag
agacagaagcgatcgggaccatcttcaaactcggtcaagaaagcaagagattccacttca
tcatgtactccttgtgataagaaatcaacgaagacactgacctttgggaggtacggaagt
ggaggccaaacaagactagtttggagtgacaaaaaagacttatgccaggcacaataa
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