KEGG   Glycine soja (wild soybean): 114368491
Entry
114368491         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
gsj03015  mRNA surveillance pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114368491
  09122 Translation
   03013 Nucleocytoplasmic transport
    114368491
   03015 mRNA surveillance pathway
    114368491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114368491
   03041 Spliceosome [BR:gsj03041]
    114368491
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114368491
    TREX complex
     114368491
Spliceosome [BR:gsj03041]
 Complex C
  Other components
   EJC/TREX
    114368491
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114368491
SSDB
Motif
Pfam: ASD1_dom DUF2330
Other DBs
NCBI-GeneID: 114368491
NCBI-ProteinID: XP_028181539
LinkDB
Position
9:39935916..39937791
AA seq 173 aa
MSAVMDMSLDDIIKNNKKSGFGSSRGRIRPFGYGPTHRFPNRAANRAAPYATAKASKVTW
QHDLYADQHVAAAGYPAQGGRAASIEIGIKLYISNLDYGVSNDDIKLAEDLGTLPIWVFN
AGFSLNDEIDTSSIESYVQGAFDGIEFARGSPTSQWDRLRKLRRLLVGTVLES
NT seq 522 nt   +upstreamnt  +downstreamnt
atgtctgcagtcatggatatgtcgctcgacgacataatcaagaacaacaaaaaatctgga
ttcggaagctcccgtggccgaatccgaccctttggatatggacctactcatcggttcccc
aaccgtgccgccaatcgcgccgcaccttatgccaccgctaaggcgtcaaaggtgacgtgg
caacatgatttatatgcagatcagcatgtggctgcggcggggtaccctgctcaaggtggt
cgtgcggcttccatagaaattgggatcaagctttacatttcaaacttggattatggtgtt
tccaatgatgatatcaagctagcagaagaccttgggacattgccgatatgggtgtttaac
gctggtttcagccttaatgatgaaattgatacatcatccatagaatcctatgtgcaagga
gctttcgatggcattgaatttgcaagaggctctcctacatcacaatgggaccgtcttaga
aagttaagacggttgttagttggaaccgtattagaaagttag

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