Glycine soja (wild soybean): 114368719
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Entry
114368719 CDS
T06057
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
114368719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsj04040
]
114368719
Ion channels [BR:
gsj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114368719
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEM95
DUF6525
Motif
Other DBs
NCBI-GeneID:
114368719
NCBI-ProteinID:
XP_028181752
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All DBs
Position
9:complement(37792250..37805880)
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AA seq
785 aa
AA seq
DB search
MKENQQGKVANFEKHGEPAPSETHAQHDELENSRFGKVISRTKSASISIPMVSMEPYERE
TSLVGHTGPLPSVRKSPIMHVNGSLYATNGTENLLHQSIFVKGNKVVESKTEKISTLDRK
DENHWNNNYDRKNEHLLRSGLLGMCNDPYCTTCPTYFRVSLQRFSKASTVFDPQFHFHNA
LYGDAKGLGRKIMSFFSSYVPGVINPHSKVVQQWNKFLAIFCMVAIFVDPLFFFLIYVQK
GGKCISIDWDMTKALVVVRTMNDVIYFLNILLQFRLAYVSPESTVVGAGDLVDHPKKIAL
HYLKGYFLFDLFVVFPLPQIMIFLVLPKHLGTSGANYAKNLLRAVILVQYIPKLFRILPL
LIGQSPTGFIFESAWANFIINLLIYMLASHVVGSCWYLFGLQRVNQCLRDACGNSDIDRC
MTVIDCGRHGHTRNNYSDQTSSLWSNNSDAIACLNPSSSGFRYGIYVNGVPLTIETSVAN
KYIYSLFWGFQQISTLAGSLTPSYFWGEVLFTMAIIGLGLLLFAVLVGNIHNFLQGLGRR
RLEMQLRGRDVEQWMSHRRLPEDIRRKVRQAERYNWAATKGVNEEMLMENLPGDLQREIR
RHLFKFVKKVRIFTLMDEPFLDSICQRLRQKTYIKGSIILSQGCLVEKMIFIVRGKLESI
GENGIGVSLSEGDACGEELLTWYLEHSSVSKDGKRVRLPGQRWLSNRTVKCLTNVEAFSI
RAEDLEEVTTRFMRFLRNLRVQGSLRYESPYWRSLAAVRIQVAWRYRKKRKNCVDTSKLD
QSFNS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaatcaacaaggaaaagtggctaattttgaaaaacatggggagccagcgcca
tcagaaacacatgcacaacatgatgaacttgagaattctagatttgggaaagtgatatca
aggacaaaaagtgcatcaatttctattcctatggtctccatggagccatatgaaagagaa
actagtcttgtgggacatactggtccacttcctagtgtgagaaaatcccccataatgcat
gtgaatggttcactatatgctaccaatggaactgaaaatctattgcatcagagtatattt
gtgaaaggaaacaaagtagtggagagcaagacagaaaaaatttctactcttgacaggaaa
gatgaaaatcattggaataacaactatgatagaaagaatgaacacttgctgagatctggg
ctactgggaatgtgtaatgatccttattgtactacttgccccacttacttcagggtctct
ctgcaaagattttcaaaagcttccactgtctttgatccccagtttcacttccacaatgct
ctttatggggatgccaagggtttggggagaaaaattatgtctttcttctcttcatatgtt
cctggagttataaatcctcactcaaaagttgtacaacaatggaacaaatttttggccatt
ttttgcatggtggcaatttttgtggatccattattttttttcttaatctatgtgcagaag
ggtggtaaatgtatatctatcgactgggacatgacaaaagcacttgttgtagtaagaacc
atgaatgatgttatatatttcttgaacattcttctccagtttaggctggcctatgtttct
cctgagtcaacagtggttggtgctggagatttagttgatcatcccaagaaaattgctctt
cattacttgaagggttattttctttttgacttgtttgttgtatttcctcttcctcagata
atgatatttttggtcctaccaaaacacttggggacatcaggagcaaactatgctaagaat
cttctgcgtgcagtgatccttgtgcagtatattcccaaattattcaggattctgcctctg
ctaattggacaatctccaacaggatttatatttgagtcagcttgggcaaatttcattata
aatcttctcatttacatgcttgctagccatgttgttggatcttgttggtacctctttggt
ctacagagggttaatcaatgcttgcgagatgcctgcggtaattctgatattgatagatgc
atgacagtcattgattgtggaagacatggtcataccagaaacaactattcagaccaaaca
tcatctctgtggagcaacaattcagatgccattgcttgtttgaatccctcctctagtggt
ttccgttatgggatctatgtcaatggtgtacctcttactatagaaactagtgtggctaac
aaatatatttattcactattttggggattccagcaaatcagtactctggctggtagttta
accccgagctatttttggggggaagtcctgtttacaatggccatcataggattgggactc
ttgctttttgcggttcttgttggaaacatacataactttctccaaggtcttggacggaga
aggctagaaatgcaacttagaggccgcgatgttgagcaatggatgagccatcgtcgctta
ccagaagatataagaaggaaagtacgacaggctgaacggtataattgggctgcaaccaag
ggagtgaatgaagaaatgctaatggagaatttgccaggagatctccagagagagatacga
cgccatctcttcaaatttgtaaagaaagtccgaattttcaccctgatggatgagcctttc
ttagattccatttgtcaaagattgagacagaagacatacatcaaaggaagtataattttg
agtcaaggttgtctagtagagaagatgatctttattgtgcgtggaaaattggagagcatt
ggagaaaatggaattggagttagcttgtctgaaggagatgcttgtggtgaagaacttctg
acatggtatcttgaacattcttctgtaagcaaagatggtaaaagagtaaggcttccagga
cagaggtggcttagcaacaggacagtaaagtgcttaacaaatgtggaggctttttcaatc
cgagctgaagatcttgaagaagtcacaacccgattcatgagattcttgcggaatcttcgt
gttcaaggatccctaaggtatgaatcaccttactggagatccttggcagcagttcgaatc
caggttgcatggagatacaggaagaaacgtaaaaattgtgttgatacctcaaaattagat
caatcatttaactcatag
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