Glycine soja (wild soybean): 114368799
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Entry
114368799 CDS
T06057
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114368799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114368799
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
114368799
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
114368799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
114368799
NCBI-ProteinID:
XP_028181857
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Position
9:38876648..38883263
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AA seq
757 aa
AA seq
DB search
MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEV
LGRLDQIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
SRDEDFFGELQKMLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLD
ISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGF
LGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPR
RNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFE
PYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFS
DNSRPFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKR
RNIPNYIFPGGVRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRS
EDIMDNNPRNSKSPVSLAPPSREVNEDISPISASSSCSMKFDESEVNSIGGQKSEKPCLN
SPGEIPSGDSGTNGSVTNNQQVNPVLAAADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEP
EELEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVISKEITCSTHLFSNEILEELEP
AELSAPLLSGPPAPLPMKKPLIRLNFTSLGKAADKSA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctggattgagcaatcagaataatgggcagcaaagattaggcataactgag
cccatttcattggctggaccaactgaggatgatgtgatcaagacgcgtgaacttgagaag
tacttgcaaggtgttggattgtacgagagtcaggaggaggctgtgggaagggaggaagtg
cttggcaggctggaccagattgtgaagatttgggttaagaacatcagccgggcaaagggg
ttcaatgaacaactagtgcatgaagcaaacgccaagatttttaccttcggctcttatcgg
ttaggggtgcatggtcctggagctgatatagataccctttgtgtgggacctagacatgca
tccagagatgaagatttctttggtgagctacagaagatgctatctgagatgcaagaagta
acagaattgcaccctgtgcctgatgctcatgtgcctgtgatgaaattcaagtttaatgga
gtttctgttgatctcctgtatgcaagattagcgttgtgggttattcctgatgatttagat
atatcacaggaatcaatattacaaaatgttgacgaacaaactgttcttagtctaaatggt
tgtagagtaactgatcaggtcctgcgattggttccaaatattcagacctttcgcacgaca
ttgagatgcatgaggttttgggccaagcgtcgtggtgtatattccaatgttgcaggtttt
cttggtggtataaacctggcattgcttgttgctcgaatatgccagttatatcctaatgca
cttcctaatatgttagtatctcgattctttagggtatatactcaatggcgatggccaaat
ccagtcatgctttgtgctattgaagaaggatctcttggactatcagtttgggatccaaga
agaaatcctaaggatagatatcatctaatgcctataattactcctgcttatccttgtatg
aactccacttacaatgtgacatcaagtacattgcgtgttatgtcagatgagtttcgaagg
ggaagtgaaatatgtgaggctatggaggctagcaaggctgattgggatactctttttgag
ccttatcccttttttgaatcatacaagaattatctacagatagatataacagcagagaat
gcagatgaccttagacaatggaaaggttgggttgagtctcgtctccgccagttgacattg
aagattgagaggcacacttatggtatgcttcaatgtcatccacatcctggtgaattctca
gacaattctagaccctttcaccactgttactttatgggtctgcagcgtaagcaaggagtt
ccagtgaatgaaggtgaacagtttgatataaggctaactgttgaagaatttaaacattct
gtcaatgcttacactctatggaaacctggaatgaatatccatgtgtcccatgtgaaacgc
cgtaacattcctaactacatatttcctggtggtgtccgacctaccttcccatcaaaagta
actgccgagaataaacaaagttccaaatcaagggttcctggccatggtcaagctgaaaag
cctcaaggaggtaaaacagttgtagttggagcagatgatgtaaggaagagaaagagatca
gaggacataatggataataacccaaggaattccaagtcccctgtatctttagctcccccc
agcagggaagttaatgaggatatatctcctattagtgcttcaagttcttgttctatgaaa
tttgatgaatcagaagtcaatagtattggtggacaaaagagcgagaaaccttgtctgaat
tctccaggggagattccttctggggatagtgggaccaatggatcagtgacaaacaaccaa
caagtgaaccccgtacttgcagctgctgatacatctaattctaaagaagaagaaaagcta
gccattgaaaagattatgtccggtccgtatgatgcacatcaagcctttccagaagaacct
gaagagcttgaagacgatactcagtataaaaatcaagacaaagattctggtgggaacatg
aaaaacaacatggaatctttactctcaaagcctgcagtggcagaagagccagttatttct
aaggaaattacttgttcaactcatttattctccaatgagatcttggaggagcttgagcct
gctgagctatcagcaccattgttaagtgggcctcctgcacctttaccaatgaagaagccg
cttatcaggttgaacttcacctccttaggcaaagctgctgacaaaagtgcttaa
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