Glycine soja (wild soybean): 114368811
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Entry
114368811 CDS
T06057
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114368811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114368811
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114368811
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
114368811
NCBI-ProteinID:
XP_028181874
LinkDB
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Position
9:complement(6445064..6448799)
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AA seq
221 aa
AA seq
DB search
MGEEEEEEVSVTALHHPNSGNDDQSLEFDIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKS
NYAASGIRTCVEAVLLVELFKHPHLLLLQIRNSIYKLPGGRLRPGESDTDGLKRKLARKL
SVNEDGDGSEWEVGECLGMWWRPDFETLMYPFIPPNVKKPKECTKVFLVKLPESRKFIVP
TNMRVLAVPLCQVHENHKTYGQIISGVPQLLSKFSFNMIES
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagaagaagaagaagaagtgagcgtcaccgctttgcatcatccaaacagcgga
aacgatgatcagagcctcgaattcgatatatatcctttgagcagttactattttggatcc
aaagatgctgttccctccaaagacctcaccttagttgatcgtgttctcaggatgaagtcc
aactatgctgccagtggaatacgaacctgcgtggaagctgtcttactggttgaattgttc
aaacatcctcatttgttgctgttgcaaataagaaattccatatataaacttcctggtggc
cgattaaggccaggtgaatcagatactgatgggttgaagcgtaagctggcaaggaagctc
tctgtgaatgaagatggggacgggtcagaatgggaggtgggtgaatgccttggaatgtgg
tggaggcctgattttgaaacattaatgtatcccttcattccacctaatgtaaaaaagcca
aaggagtgtaccaaagtcttccttgtgaagctgccagagagtagaaagttcattgtgcct
acaaacatgagggtgcttgcagttccgttgtgccaagttcatgaaaatcacaagacatat
gggcaaattatatcaggggtcccacagctgctgtcaaaattctctttcaacatgatagaa
tcttga
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