KEGG   Glycine soja (wild soybean): 114369297
Entry
114369297         CDS       T06057                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114369297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114369297
Spliceosome [BR:gsj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114369297
 Complex B
    114369297
 Complex C
   U2 SnRNP specific factors
    114369297
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 114369297
NCBI-ProteinID: XP_028182303
LinkDB
Position
10:complement(50468872..50473282)
AA seq 801 aa
MLGSLPILPLPAPPSDGNLGPLPESQVIDNEEQNKSNSVSVPAPATVATHTRTIGIIHPP
PDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLSEFRAQNQ
SSGLQPPSQPADSAVPESAPSDSNGVAAAAEKIDVSAQFKAVRKVLEPPEAEQYTVRLPE
GITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFLKPTHSMFTFFTSLADAYSK
VLMPPKGLPEKLKKSVSDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWH
DFAVVETIDFADDEDEELPPPMTIEEVIRRSKVTAMEEEDIVEPGKEIEMEMDEEEAQLV
EEGMRAASLEDRDDVKQNEVRVTEDPEPPMRIVKNWKRPEERISAERDSTKFVVSPITGE
LIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAADDEISRNIVGLARTRPDIFGTT
EEEVSNAVKAEIEKINDEQPKQVIWDGHTGSIGRTANQAMSQTIGSEDQNDAFNNEAKNL
LGPAAPPPRPGMPSIRPLPPPPGLALNLPRVPVQYSVPHSGALPMPPPRPMMPSIRPAPP
PPMSMNSGQQSVMAGQPHPMHPSIHMNNQGIPIPPPPGSQFTPVPVPRPFVPLSVPPSVM
PMMHPPPLPQGVPPPPPPEEAPPPLPEEPEPKRQKLDDSALIPEDQFLAQHPGPVCICVS
VPNVDEGNLKGQVLEITVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNMSLAH
YNVGGGETLTLTLRERGGRKR
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgttaggttcattaccaatattgccactccctgctcctccctctgatggaaatctaggt
cctctccctgagtctcaagtgattgataatgaggagcagaacaaatcaaattctgtttct
gttccagcgccggcaacagttgccacccacaccagaacgattggaattatacatccgcct
ccggacattaggaccattgttgataaaacctcccagttcgtcgccaagaatggtccagaa
tttgaaaagaggatcattgcaaataacacaggaaatgtcaagttcaatttcttgaactca
tcagatccctatcacgcttattatcaacaccggttgtccgaatttcgcgctcagaatcag
tcttcagggctgcaacctccttcccagcctgcagactcggctgtccctgaatcagccccg
tctgatagcaacggcgtagcagcagcagcagaaaagatcgacgtttctgcccagtttaaa
gctgtaaggaaagtgcttgaaccccctgaagctgaacagtatacagttcggcttcctgaa
ggaattacaggggaagagctggatattataaagcttacagcacaattcgtggctcgaaat
gggaaatcttttttgacagggttgactagtagggaagttaataatccccagttccatttt
cttaaaccgacccacagcatgtttacgttttttacttccctcgcggatgcatattctaag
gttttgatgcctccaaaaggtttgccggagaagctaaagaagagcgtgtctgatatgact
actgtccttgaaaggtgtgtgaataggctggagtgggagcgttcgcaagagcaagctagg
caaaaggctgaggatgagatagaacaggaaagaatacaaatggctatgattgattggcat
gattttgcggtggttgaaacaatagattttgctgatgatgaggatgaagagttacctcct
ccaatgactattgaggaggttataaggagaagcaaggtgacagccatggaagaagaagat
attgttgagcctggaaaggagattgaaatggaaatggatgaggaagaggcccagcttgtc
gaggagggtatgagagctgctagtttggaagaccgtgatgacgtgaagcagaatgaagtc
agggttactgaagaccctgaaccaccgatgagaattgttaagaactggaagagaccagag
gagaggatttctgcagaaagagattcaaccaagtttgttgtttctcctatcactggcgag
ttaattcctattagtgagatgtcagaacatatgcggatttctctcattgatcccaagtac
aaagaacaaaaggaaagaatgtttgccaaaattcgagagacaactttggctgcggatgat
gaaatttcaagaaacattgttggacttgctcggacccgtcctgatatattcggtactaca
gaagaagaggtctccaatgctgtcaaggcagagattgagaagataaatgatgagcaacca
aagcaggttatatgggatggtcacactggtagcattggacgtactgcaaaccaagccatg
tcacaaactattggaagcgaggatcaaaatgatgcttttaataatgaagccaagaacctt
ctgggtcctgctgcacctcctccaagacctggtatgccttcaattcgtcctcttccgcct
ccacctggactggcattgaatcttccccgtgttcccgtccaatattctgttccccatagt
ggtgcccttccaatgcctccacctagacccatgatgccatctattcggcctgctcctcct
cctccaatgtcgatgaatagtggacagcagtcagttatggcgggccaacctcacccaatg
catccatcaattcatatgaataaccaaggaattcccatacccccaccaccgggatctcag
ttcactcctgttccagttccgcgaccttttgttcctctttctgttccaccatcagttatg
cctatgatgcacccaccacctttgcctcaaggagtgccaccgccaccgccaccagaggag
gctcctcctccactcccagaagaaccagaaccaaagaggcagaaacttgatgattctgct
ctgatacctgaagatcaatttctggctcaacatcctgggcctgtttgcatttgtgtatct
gttcctaatgttgatgaaggaaatcttaagggacaagttctggaaattacagtgcaatct
ttgtctgaaactgttggtagtctgaaggaaaaaattgctggggagatccagctccctgct
aataagcagaaattgagtggaaagcctggctttctcaaggataatatgtcacttgcccat
tacaatgttggtggaggtgaaacacttaccctcacgttaagagagcgtggtggtagaaag
agatga

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