Glycine soja (wild soybean): 114369697
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Entry
114369697 CDS
T06057
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114369697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114369697
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114369697
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114369697
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Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
114369697
NCBI-ProteinID:
XP_028182743
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Position
10:41770918..41773478
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AA seq
197 aa
AA seq
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MEEEKEAVMVTPGEVLGRTSDVKAGRGAYAALHNNTVYASLTGFRHTVPPAPDSSDLRPT
VEVTGHKAHGPVPQPGSVVIARVTKVMARSASADIMCVGPKSVREKFTGIIRQQDVRATE
IDKVDMHLSFHPGDIVRALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQ
CPLTGQIEQRKVAKAAS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaagaagcagtgatggtaacaccgggagaagtgttgggtagaaccagc
gatgtcaaagctggaagaggagcatacgcggcgcttcacaacaacaccgtatacgcctcc
ctaaccggcttccgccacaccgtacctcccgcccccgactcttccgacctgagaccgact
gttgaagtaactggtcacaaggcccatggacctgttccacagcctggatctgtagtcatt
gctcgggtcaccaaagtgatggctcggtccgcttcagctgatattatgtgtgttggacca
aagtctgttcgagaaaaatttactggcatcattaggcagcaagatgttagagcgactgag
attgataaagtagacatgcacttgtcttttcatcctggtgacattgttagagcccttgtg
ctttctcttggagatgcacgggcgtactttctgtctactgcaaagaatgaacttggtgtt
gtttctgcagaaagcattgctggtgcaactatggttccagtaagttggacagagatgcag
tgcccgttaactggtcaaattgagcaaagaaaggttgcaaaggctgcaagctga
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