Glycine soja (wild soybean): 114369716
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Entry
114369716 CDS
T06057
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114369716
Spliceosome [BR:
gsj03041
]
Common components
Common spliceosomal components
General mRNP proteins
114369716
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
114369716
NCBI-ProteinID:
XP_028182762
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Position
10:complement(51898168..51906840)
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AA seq
597 aa
AA seq
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MDFDEYEYLENAVENPQAKHRANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPKHSKPG
DDSHDRERLREKRGSSRHGSKSRDGDKDRSSGGIRDRKRDRDRDHENKDRKRDHGDKDVK
RDRERDRDHGRDQERDRRDRGSEAERQQRSRSRSDRHRTDLDDKDRETSRDREYRDIERS
RDKDYKDRGRVRESRERDRQDRRHKEKKEEATEPEADPERDQRTVFAYQISLKADERDVY
EFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEA
EKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPL
DESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGRTIKVSAVTDQSGMQEVGGNTGDFDD
DEGGGLSLNACSRAILMQKLDRSGTASSMVGSIGNSGVNNTGLNLPATGNILAAAPVGGL
AGGGLQIPTATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALK
HIYVDKKSAGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPDSR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgagtatgagtatttagagaacgcagttgaaaaccctcaagctaagcac
agggctaatggtggggacaaaagtgtgaaatctgaagagagagggcggaatgggagttca
aagcataagggtgatgatgatgatgatgttgatctccatcccaagcattcaaaacctgga
gacgattctcatgatcgcgagaggctcagagaaaaaagaggctcatcccgtcatggttca
aagtccagagatggagacaaggacagaagctctgggggcattagggataggaagagggat
agggacagagaccatgagaacaaggataggaagagagaccatggggacaaggatgtgaag
agagatagggagagagacagagaccacggtcgtgaccaagaaagggacagaagggaccgt
gggagtgaggctgagcggcaacagcgaagcagaagtaggtctgataggcatcgaactgat
ctggatgacaaagacagagagacaagtcgtgacagggagtatagagatatagagagaagc
cgggataaggattacaaagacagaggaagggtgagggaatcaagggaacgggatagacaa
gacagacggcataaagagaaaaaggaagaagcaacagaacctgaggctgatcctgaaaga
gatcaaaggactgtgtttgcttatcagatttctctgaaagcagatgaaagagatgtatat
gagttcttctcaagggctggcaaggtgcgagatgttcgcttgattatggatcgcaattca
agacgttccaagggtgttgggtatattgagttttatgatgtcatgtctgtccccatggca
atagcactttcgggccaacctcttcttggtcaaccagtgatggtgaagccatcagaagca
gaaaagaatttggttcagtccacaacatctgttgctaatggactcactggacttataggc
ccttattctgggggagcaagaaagctgtatgttggcaatctgcatatcagtattactgaa
gctgatattcgtagggtgtttgaagcatttggtcaggttgagctagtccagctgcctctt
gatgaaagtgggcactgcaaaggttttggctttgtgcagtttgcacgccttgaagatgca
agaaatgctcagagcttgaatggtcaattagagattggtggtaggacaatcaaggtatca
gctgttactgatcaatctggaatgcaagaagttggaggaaatactggtgattttgatgat
gatgaaggaggtggcttgtccttgaatgcatgttctcgagcaattctcatgcagaagttg
gatcgtagtggtactgcatcaagcatggttggttccatcggtaattctggtgtcaacaac
acaggtcttaatctacctgcaacaggaaacatactcgcagctgcgcctgtgggtggattg
gcaggtggaggtctccaaattcccacggctacaattccttctattgatccaatcggtgtt
ccaagtgaatgcttaatgttaaagaatatgtttgatcccaaagatgagactgaaccagat
tttgatttggatattaaagaagatgttgaagccgaatgctctaagtttggggccttaaaa
cacatatatgttgataagaagagtgctggttttgtctatttacgatttgaagatacccaa
tctgcaataagtgcacagcaggccttgcacggaagatggtttgctgggaagatgatcact
gcaagcttcatggtgcctcagtcatacgaggataaattcccagacagcagataa
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