Glycine soja (wild soybean): 114370153
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Entry
114370153 CDS
T06057
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114370153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114370153
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114370153
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
114370153
NCBI-ProteinID:
XP_028183239
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Position
10:complement(1953777..1957101)
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AA seq
585 aa
AA seq
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MRPRVNYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPAT
VVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVISDE
CLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFP
DSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLANLLRGAPQLVEL
GTGTYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYAT
IQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALT
EQGLVSVSEGCTKLQSVLYFCRQMTNSALDTIARNRPNMTRFRLCIIEPQAPDHLTHQPL
DAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGC
DNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKLPRLNVEVIDE
RGPPDSRPESSPVEKLYMYRTVSGPRLDMPGYVWRMQDDSALRIS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgagagtaaattactccttccccgaggaggtgctggagcacgtgttctccttc
atcgagtgcgacaaggaccgaggctcgatctccctcgtctgcaagtcctggtacgagatc
gagcgctggtgtcgccggagagtcttcgtcggaaactgctacgccgtctctccggccacc
gtcgtcaaccgcttccccaaggttagatccatcgccatcaaggggaagccgcacttcgcc
gacttcaatttggtccccgagggttggggcgcttatgtgggcccttggatcaaggccatg
gccgctgcctacccctggcttcaggagatcaggctcaagaggatggttatctccgacgaa
tgcttggaactcatcgccaaatcgtttaagaacttccaagtcttggttctcacctcttgc
gagggtttcaccactgacggacttgctgccattgccgccaattgcaggaatttgagggag
ttggagttgcgggagagtgaggtggacgacatttgtgggcattggctgagccattttcct
gattcatacacatcgttggtttcccttaacatttcttgcttaggcaatgaggtgaatttg
tctgccctagagcgccttgttagtaggtgtcccaacctgcagactctccgcctcaaccgt
gctgtgccgctagacaggcttgccaaccttcttcgcggagctcctcaattggttgagtta
ggcacgggaacctacacgactgagatgcgaccggaggtcttcacaaacctggcggaggca
ttttctgggtgcaagcaattgaagggcttgtctggattttgggacgttctcccatcctac
cttccagctgtctatcccatctgctccaacctgacatcactgaacttgagttatgcaact
attcaaagccccgatcttatcaagcttgttggtcaatgtgagagtttgcagcgtttatgg
gtgctggattacatagaagatgctggtcttgaagtgattgctgcatcgtgtaaggatctg
agggagttgagggtgtttccctctgacccgtttgggttagaaccaaatgtagcattgaca
gaacagggccttgtatccgtgtctgaaggctgcaccaagctccagtcagttctatatttt
tgtcgccaaatgactaattctgccttggatacaattgccaggaacaggcctaatatgaca
cgttttagactatgtattatcgagcctcaagctcctgaccatcttacccatcaacctctg
gatgctggttttggagctattgtagagcattgcaaggatcttcagcgcctttccctttcc
gggcttcttactgaccgtgtttttgaatatattgggacttatggcaagaagcttgagatg
ctttctgtggctttcgcgggagatagcgatctgggactccatcatgtgctgtctgggtgt
gacaaccttaggaagctggagatcagggactgcccctttggtgacaaagccctcttggcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgcttggtgagttat
ggagcatgcaaactgctgggtcagaaactgccaagacttaatgtcgaagtcattgatgaa
agaggacctccagattcaaggccggagagtagtcctgttgagaagttatacatgtacagg
actgtttctgggccaagattggacatgccaggctatgtatggagaatgcaagatgattct
gcattaaggatttcttga
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