Glycine soja (wild soybean): 114370346
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Entry
114370346 CDS
T06057
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114370346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114370346
03009 Ribosome biogenesis [BR:
gsj03009
]
114370346
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114370346
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114370346
Pre-60S particles
114370346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT_GCN1
TPR_IPO5
HEAT
TPR_IMB1
IBN_N
HEAT_2
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_EF3_N
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
114370346
NCBI-ProteinID:
XP_028183457
LinkDB
All DBs
Position
10:51972797..51988322
Genome browser
AA seq
893 aa
AA seq
DB search
MAAPTPSWQPQEQGFKEICGLLEQQISHSSSADKAQIWQHLQRYSHLPDFNNYLAFIFSR
AEGKSVEVRQAAGLYLKNNLRNMFKSMQPAYQQYVKSELLPCLGAADKHIRSTAGTIISV
VVQIEGVVGWPELLQALVSCLDSNDLNHMEGAMDALSKICEDIPQYLDSDVPGLAERPIN
IFLPRLFRFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILANDPVAEVRK
LVCAAFVQLIEVRPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAYCDAQLPPENL
REFLPRLIPVLLSNMAYADDDESVIEAEEDGSQPDRDQDLKPRFHVSRFHGSDEVEDDDD
DVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVQAKLSAGGDDAWKDREAAVLALGAI
GEGCINGLYPHLLEIVAFLVPLLDDKFPLIRSISCWTLSRFSKFIIQGIGHPKGYEQFDN
VLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMTAFGKYQRRNLRI
VYDAIGTLAEAVGGELNQPVYLDILMPPLIEKWQQLSNSDKDLFPLLECFTSISHALGTG
FTQFAEPVFRRCINIIQTQQFAKADPAATTGVQYDKEFIVCSLDLLSGLAEGLGSGIESL
VAQCSLRDLLLHCCVDDAPDVRQSAFALLGDLARVCSVHLDSRLSEFLEAAAKQLEISKV
KEAISVANNACWAIGELAVKVHQEISPVVLTVISCLVPILQHAEGLNKSLIENSAITLGR
LAWVCPELVSPHMEHFMQSWCTALSMIRDDVEKEDAFRGLCAMVKANPSGALSSLVCMCK
AIASWHEIRSEDLHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKEKLSKYQV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgactccatcgtggcagcctcaggagcaagggttcaaggagatctgcggc
ctccttgagcagcagatttcgcattcttcttccgccgataaggctcagatttggcaacac
cttcagcgctactcgcacctccctgacttcaacaattacctcgccttcatcttctcccgt
gccgagggaaaatcagtggaggttcggcaggctgcggggttatatctgaagaataacctc
agaaacatgttcaaatctatgcagcctgcataccaacagtatgtgaaatcagagttgctg
ccttgtcttggtgcagcagataagcacataaggtctacggcaggaactattattagtgtt
gttgttcaaatagaaggagttgttgggtggcctgaattgttgcaagccctcgtaagttgc
ttggatagtaatgatctaaatcacatggaaggtgctatggatgcgttatccaagatctgt
gaggatattcctcaatatcttgactctgatgtaccagggttagcagaacgccctattaac
atatttcttcccagattgtttcggtttttccaatctcctcatgcttcattgagaaagcta
tcattgggttctgtaaatcaatacattatgttaatgccttctgccttatatgtatccatg
gatcaatatcttcaaggtttgtttattctcgctaatgaccctgttgctgaagtacggaag
ttggtttgtgcagcatttgttcagctaattgaagtccgcccatctttcttggagccacat
ttacggaatgtgattgaatacatgttacaagtcaacaaggatacagatgatgaagtagcc
cttgaagcctgtgaattttggtctgcttattgtgatgctcaactgccacctgaaaactta
agagaattcttgccccgtcttattccagtattgttgtcaaacatggcttatgcagatgat
gatgaatcagttattgaagctgaggaagatggttctcaacctgatcgagatcaggatctt
aaacctcgatttcacgtatcaaggtttcatggatcggatgaagtagaagacgatgatgac
gatgttgtcaacacatggaatttacggaaatgcagtgcagctgctcttgatattctttca
aatgtgtttggagatgagatccttccgactcttatgcctattgttcaggctaagttgtct
gctggtggggatgatgcttggaaagatagggaagctgctgtcttggctcttggtgctata
ggtgaaggttgcatcaatggtctttatccgcatctgttggagattgtggcatttcttgtc
cctcttcttgatgataagtttcctctgatacgaagtatttcatgctggacactatcacga
tttagcaaatttattattcagggtattgggcatccgaaaggctatgaacagtttgataat
gttcttatgggtcttctacgaagaattttggatgataataagcgggttcaagaggctgct
tgttcagcttttgcaacgctggaagaggaggctgctgaagagttggcaccacgcttggaa
attatactaaagcacctaatgactgcatttgggaaatatcagagacgaaacctcagaatt
gtatatgatgctattggaactctagctgaagctgttggaggagagctgaatcagcctgtt
tatcttgacattctcatgccaccattaattgagaaatggcagcaactttcaaattcagac
aaagatctttttccactcctggaatgctttacatctatatcacatgctctgggtactggt
ttcactcaatttgctgaacctgtatttaggaggtgcataaatataatccagacccaacaa
tttgctaaggctgatcctgccgccaccacaggggttcagtatgacaaggagtttattgta
tgctctcttgatttgctttctggactagcagagggtcttggcagtgggatagagagtttg
gttgcacaatgttctttgagggacctacttctgcattgttgtgtggatgatgctcctgat
gtaagacaaagtgcctttgccttacttggagaccttgcgcgagtgtgctcggttcatttg
gactctcgtttgtctgagtttcttgaggctgcagccaaacaactggagatttctaaggta
aaggaggctatttcagtagcaaataatgcatgctgggcaattggagaattagcagttaag
gttcatcaagaaatttctcctgttgttttaactgtaatttcatgcctggtcccaattctt
cagcatgcggagggactcaacaagtcgcttatagaaaatagtgcaataacactggggagg
cttgcatgggtctgtccggagcttgtatcaccacatatggagcatttcatgcaatcttgg
tgcactgctttgtcaatgatacgagatgatgttgagaaagaggatgcttttagaggtcta
tgtgctatggttaaagctaatccttctggagctctaagttcgctagtttgcatgtgcaaa
gccattgcaagttggcatgaaataaggagtgaagatttacacaatgaagtctgccaggtc
ttgcatgggtataagcagatgctgcgcaatggagcatgggaccagtgtatgtctgctttg
gagcctccagtaaaagaaaagctttcaaaatatcaagtataa
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