Glycine soja (wild soybean): 114371181
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Entry
114371181 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsj03009
]
114371181
03036 Chromosome and associated proteins [BR:
gsj03036
]
114371181
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114371181
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114371181
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114371181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
YgbB
ERCC3_RAD25_C
Cas3-like_C_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
114371181
NCBI-ProteinID:
XP_028184423
LinkDB
All DBs
Position
10:complement(38998533..39004927)
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AA seq
735 aa
AA seq
DB search
MASTIGISSSISIYKTPSFQLFKRPAATTTSVFFNTLPRNRDATLSSVPSAIATPSILTE
QPLKGLTLDDLSNSDQFGYDFEPDTNVSDHELDISKLGLPSPLVHSLQKRGIISLFPIQR
AVLVPALEGKDIIARAKTGTGKTLAFGIPILKGLTNDDEQSPHRRSGRLPKALVLAPTRE
LAKQVEKEIQESAPYLKTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLVNGNSLKLS
EVQYLVLDEADQMLAVGFEEDVEVILDKVPTQRQTMLFSATMPGWVKKLSRKYLNNPLTI
DLVGEQEEKLAEGIKLYALLATATSKRTVLSDLITVYAKGGKTIVFTQTKKDADEVSMAL
TSSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDA
ETFVHRSGRTGRAGKEGTAILMYTSSQRRTVRSLERDVGSKFEFVSPPAMEEILESSAEQ
VVATLNRVHPESVEFFTATAQKLVEEQGARALAAALAQMSGFSQPPSCRSLINHEQGWTT
LQLTRDSDTSGRYFSARSVTGFLSDVYSQAADEVGKIHLIADERVQGAVFDLPEEIAKEL
LNKDMPSGNTISKITKLPPLQDNEPASDFYGKFSDRDRSNRRGSRDQRGFRSSRGWEGGQ
DSNDEFGRGGRSFRSGNNRSRTGKSSGNDWLIGGSSRSSRFSSSNRDGGHGGACFNCGKP
GHRASDCITQKRVFF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaccataggtatctcttcttccatctccatatacaaaaccccctcttttcaa
ctcttcaaaagaccagccgccacaaccacctccgttttcttcaacacccttccccgtaac
cgtgacgccacactctcttccgttccttccgccattgccaccccatccattctcaccgaa
caacccttaaagggcttaactttggacgaccttagtaatagcgaccaatttggctatgac
ttcgaacccgacaccaacgttagcgaccacgaactcgacatttccaagttgggtttacct
tcgcccctcgtccactccctccaaaaacgtgggatcatcagccttttccccattcagaga
gctgtgttggtgcctgcactagaaggtaaagatatcattgctcgtgcaaagacagggact
ggcaagactttagcattcggaattccaattcttaaaggtctcactaatgatgatgaacaa
agtcctcacaggcggtctgggaggcttcctaaagcgttggtccttgcacctactagggag
ttagcaaagcaagttgagaaagagatacaagaatctgcaccttacctcaaaacagtttgt
gtttatggtggtgtttcttatgtaacacagcagagtgccctttcacggggtgttgatgtg
gtggttgggacgccgggtagaataattgacctggtgaatggaaacagccttaaactgagt
gaggttcagtatttggtgctcgatgaagctgatcagatgcttgctgttgggtttgaggag
gatgtggaggtcattttagataaggtcccgactcagcgccagaccatgcttttttctgcg
accatgcctggttgggttaagaaactgtccagaaagtatttgaataaccctttgacgatt
gatttggttggtgaacaagaagagaagcttgctgaagggatcaaactttatgcattatta
gccactgccacttcaaaacggacagttctttctgatcttataactgtttatgcaaagggt
gggaagactattgtttttactcagacaaaaaaggatgctgatgaagtatcaatggcatta
acaagtagtatagcttccgaagcactgcatggtgatatatctcagcatcagagagagaga
acattgaatggttttcggcaagggaagttcacagtgcttgttgccactgatgttgcagct
cgtggacttgatattcccaatgttgatttggttatacattatgaacttcccaatgatgct
gagacttttgtacatcgttctggccgtactgggcgtgcaggaaaagagggtacagccatt
ctgatgtacaccagtagccagaggagaacagttagatcccttgagcgtgatgtagggagc
aaatttgaatttgttagtccaccagctatggaagagattttggagtcatctgctgagcaa
gttgttgctacactaaatagagttcatcctgagtctgttgaatttttcactgcaactgca
caaaaactggttgaagaacaaggagcaagggcccttgcagctgctctagcacagatgagt
ggattctctcaacctccatcatgccggtctcttatcaatcatgaacagggatggactaca
ttgcaactgactcgagattcagatacttctggaagatatttttctgcaagatctgtcact
gggtttctttcagatgtttattctcaagctgctgatgaagttggaaaaatacatttaatt
gcagatgagagggttcaaggagctgtttttgatcttccagaggaaatagctaaagagttg
ctcaataaagatatgccatctggaaatactatctccaaaatcaccaagttacctcctttg
caagacaatgaacctgcaagtgatttctatgggaagttttccgacagagatagaagtaac
cgtagaggttctagggatcagagaggttttagaagttcacgaggatgggaaggaggccag
gactctaatgatgagtttggacgaggtggtagaagtttcagatctggcaacaacaggtct
cgaacgggaaaaagcagcggcaatgattggctaattggaggcagtagtagatcaagcagg
ttttcatcatccaacagagatgggggccatggaggggcctgttttaattgtggaaaacct
ggccatcgggcatcagattgtatcacccaaaaacgagtctttttctag
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