Glycine soja (wild soybean): 114371277
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Entry
114371277 CDS
T06057
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114371277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114371277
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
114371277
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114371277
NCBI-ProteinID:
XP_028184557
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Position
10:7597108..7602642
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AA seq
585 aa
AA seq
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MDGFLVEFIYSSLGEKMTSKREREAGDRVEDEGLDNESKRQRLDEDSSPSPPPVSVANPL
SGLANNYADIDEEEDDVRRERGSVNERSNDGSHHNGHNKYGEADDSDEEDDDSHEQFTGR
NRQVEVRKDCPYLDTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTH
SLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRHVLNPRFTAKEVEQLDKNKQWSRAL
DGSSYLPGMVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTR
KIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKTSKKNTS
IIYECFQGELEVVKEIPNKVISDKKENSENQNNAEKLSDGVNERYAFVKETSKMPFLMLG
LDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMILH
MRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKPGE
GFYRVFVQRKSEELWYEMQDLHVSETLPHLVALSETYMQIYEQQQ
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatgggttcttggtggaatttatttatagttctttaggagagaaaatgacatcaaaa
agggaaagggaagcgggtgatagagtagaggatgaagggcttgataatgagtcgaaaagg
cagaggctggatgaggattcttccccctctcctcctcctgtctccgttgcaaatcctctt
tctgggttggccaataattatgctgacattgatgaggaggaagatgatgttagaagggaa
aggggttctgtaaatgagaggagcaatgatgggtcccatcataatgggcataataaatat
ggagaggctgatgatagtgatgaagaagatgacgattcacacgaacaatttactggaaga
aatcgccaggttgaggttcggaaggactgtccttatcttgatactgttaatagacaggtt
ttggatttcgactttgaaaaattctgttctgtctccctgtcaaatttaaatgtgtatgca
tgtttggtttgcgggaagtattaccaagggagagggaagaagtctcatgcatatacacat
agtctggaagcaggacaccacgtctatatcaatctccgcactgaaaaagtctactgtctt
cctgatggttatgaaattaatgatccttcattagatgacattcgtcatgtcttaaatcca
agattcactgcaaaagaagttgaacaacttgacaaaaataagcagtggtctagggctctt
gatggttctagttaccttcccggaatggtgggacttaataatatcaaggagactgatttt
gtgaatgtaacaattcaatccctaatgagagttacccccttgagaaatttttttcttatc
cctgaaaattatcaacactgcaaatctccacttgttcatcgatttggtgaactcactagg
aaaatctggcatgcacggaactttaaaggacaggtcagtccacacgagtttctacaagct
gtgatgaaagccagtaaaaaaaggtttcggataggtgcacaatctgacccggtagagttc
atgtcatggctacttaatacgctacatgcagatcttaagacttcaaagaagaatacaagc
ataatatatgagtgttttcagggcgaacttgaggttgtgaaagagattcctaacaaagtg
atctctgataagaaagaaaacagtgaaaaccaaaacaatgctgagaaactttcagatggg
gtgaatgagcgatatgcatttgtcaaagaaacttcaaaaatgccatttctaatgttagga
ttggacttgccaccacctcctcttttcaaggatgtgatggaaaaaaatataataccacag
gttccactctttaacatactaaagaagtttgatggtgaaactgtcacggaggtggtccgt
cctcatatagcaaggatgcagtatcgtgttaccagattgcccaagtatatgattctacac
atgcgtcggtttactaagaataatttttttgtcgaaaagaatcctacgttagtcaacttt
cctgtgaagaacctggagttgaaggattacattcccttgccaacaccaaaagaaaatgag
aaattgcgaactaaatatgatttgattgctaatgttgttcatgacggcaaacctggtgaa
ggattctatagggtatttgtgcaacgcaaatcagaagaactatggtacgagatgcaggat
ttgcacgtctctgaaacacttcctcatttggttgcactttcagaaacttatatgcagatt
tatgaacagcagcagtaa
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