Glycine soja (wild soybean): 114372371
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Entry
114372371 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114372371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114372371
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114372371
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114372371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BUD22
Motif
Other DBs
NCBI-GeneID:
114372371
NCBI-ProteinID:
XP_028185684
LinkDB
All DBs
Position
10:complement(13839060..13862790)
Genome browser
AA seq
1651 aa
AA seq
DB search
MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD
KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR
TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDEFIHPGDGDESQCYSAEQLGENWTSLQ
FSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESETT
NDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYKLAEQNKLSGSLLPSQVKGILELLW
ENEARLCSYINDIQDQGFGKKAGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTK
VLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASGKRDVATGICQLLEKKEG
IFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVVKLRNAILN
GPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYRH
LKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQD
EISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEFNQLLYSSG
VSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYYITRGSPPF
TAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGVVDKAQFGDYG
MIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVERMNQLKSCEI
IGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAALTLDRKMTSNLNSRTSSGILKK
LLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFP
PWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECL
KVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPY
INKLPEALEGKAEKFSKQRNLGSMEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPA
TQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADK
LKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRV
NFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDE
DGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGPEEETHDGELSEEIEGDEDGSDVDAN
ENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIH
FRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISASE
KEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKS
YGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGKFIVEAAYHGQV
DNLETPSARICLGLPVKMGTGCHDLIQKLEI
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactaccgagggcgcgacgaactccgtcgaggcggtggcgttcagcttccta
accgacgacgagatacggcggagcagccgcgtgaagataacgagtcccattctcgtcgat
tttttgctgcaccccgtgcctgatggactatacgacgccgctttgggccctttcgatgac
aagtctctttgtaagtcgtgtggtcaaacttctaaacattgcccaggtcattttggtcat
attgagctcgtttcccctgtctacaaccctctgatgttcaatattcttagcaatattctg
caaagaacttgtttcacttgccatcattttcgggcccccagcaaagaggttgatattcgt
acatcccaattggagctcataatgaaaggggatattatcagggcaaaacgtttggaatct
attatccctggaaaaagtgtggattcttttaatccagatgaattcatacatccaggtgat
ggagatgagagccagtgttatagtgctgagcaactgggagaaaattggacctcccttcaa
tttagtgaggcaatgtctgttctaaggaaattgctgacgaaaaaacataagaaatgtcaa
aaatgtggagctaagaatcctaaaatcagcaaaccgacctttggatggtttcatatgaat
gttctctcagctgatgaaactagagcagataccattagatctgtggaaagtgaaacaacc
aatgatgatatatctttaggtggtggggatactacagacgtagaagatattacctctgca
gggactgcaaaaagagataaaagaaaaaaagagaaattgtcttacaagcttgctgaacaa
aataaactttctgggtctttgttaccttcacaggttaaaggtattttagagcttttgtgg
gaaaatgaagccaggctctgttcttatattaatgatattcaagatcagggttttggaaag
aaagccggtcactcaatgttctttctagagaatatttttgtaccaccaatcaaatttcgt
cccccaactaaaggaggtgataatgtgatggaacatcctcaaactgttttgttgactaag
gttttacagtgcaacatatccttgggagatgcccatctaaataagtcagatccctcaaag
gttctaagccggtggatggatcttcagcaatctgtaaacatgctattcgacaataaaact
gcttctggcaagagagatgtcgctactggaatttgtcaattgctggagaagaaggaaggc
atctttcgccagaaaatgatgggaaagagggttaattttgcatgtcgctctgtcatatca
ccagatccttatttagcagtcaatgaaattgggattcccccttattttgctttaagatta
tcctatcctgagagagtgactccttggaatgtagtcaagttaaggaatgctatccttaat
ggtcctgaatcccatcctggtgctacacattatgctgataaagtatcaatagtcaagctt
ccaccaaaagggaagttgctttctttgacctcaaggaaattaccaacctcaagaggagtt
attttgcatcaagggaagatatctgaccatgaatttgaagggaaagttgtgtatcgccac
ttgaaggatggcgatgttgtgcttgtcaatcgacagccaacactccataaacctagtata
atggcacatatagttcgtgttctaaagggggagaaaactgtacgcatgcactacgcaaac
tgtagtacatataatgctgatttcgatggtgacgagattaacgttcattttccacaagat
gaaatttctcgggctgaagcttacaatattgtaaatgctaacaatcaatatgtgaaacct
acaagtggggatccaattagagctttgattcaggatcatattgtaagtgctgctcttctt
acaaaaaaggatacttttctaagttatgaagagttcaatcaactactgtacagttctggt
gtatccatggctgggctaggctcattttatggcaaacatgggcagaaagttttcatctca
aattccgagagtgaaatgtttctgtttcctccagcaatatggaagcctgagcccctgtgg
acaggaaaacaggttatcagtgcattgctatactatatcaccagaggttcaccaccattt
actgctgagaagaatgcaaaaatcccgtctaactttttcaagactcagatcaggaaggga
aaaagatacaccgaagatacatcaaaaaagaaggataagcctgatgaggataaattattg
atatataaaaatgatttggtgcgtggtgtagttgataaggctcaatttggtgactatggt
atgatacatacagtacaagaactttatggatcaaatgttgctggcaacctactttcagca
ttaagtcggttattcactacctttttacagatgcatgggttcacatgtggagtagatgat
cttatgttaacagaaggaaaggatgttgaaagaatgaatcaactcaaaagttgtgagata
attggtgacagtgttcatcgtgaattcattggagtgaagaatagtgacaatatagatcca
gtcacattgcaattgaatattgagaaaaaaatacgcagtaatggagaagcagccttaaca
ttggataggaagatgacaagcaatcttaactcaagaacaagctcagggatattaaagaag
ctactatctgaaggaatattgaaaccttcaggaaaaaattgtatttctcttatgactaca
tctggagctaagggtagtatggtgaatttccagcagatatcttctcatctaggccagcaa
gagttggaaggaaaacgagtcccacgcatggtttctggaaagaccttaccctgctttcct
ccttgggattgttcccctagagcaggagggttcattattgatcggtttcttacagccctt
catcctcaggaatactactttcattgcatggctggtcgtgaagggctagttgatactgca
gtcaaaacatctcggagtggttacctgcaaagatgcctaatgaaaaaccttgagtgcctt
aaagtttgttatgatcatactgtccgtgatgcggatggttcaattattcagtttcactat
ggagaagatggtgttgatgtccatcaaactagctttatcaccgaattcggtgcattgtca
actaataaagaattggtttttagcaactattgccgtcaactagacagatccagtccatat
attaacaaattgcctgaggctcttgaaggaaaagcagaaaaattctcgaaacagagaaat
cttggttctatggagcaagcggatttcttaagattgatggagcataagtatgtctcatgt
cttgctcaaccaggtgaaccagttggtgtattagcttctcaatctgttggagaaccggca
acgcagatgaccttgaatactttccaccttgctggtcgaggtgaaatgaatgtgacactt
ggaattccacgcttgcaagaaatcctgatggctgctgcacgtgatatcaaaactccattt
atgacatgccccttgagacatgataaatctatgaaagatgctatttgtctcgctgataag
ttgaagaagattactgtagctgacataattaagagtatgaaagtttctgttgtaccagta
acggttcttggtggtcaagtttgcagtatatataaacttgtgatgaagctatataaatct
aaacagtatccagaatacactgatattacccttgacgactgggaggaaactctaagggtt
aactttgttagagagttggaggatgccattcaaaatcacatgacattgctttctaaaatt
agtggcataaaaaaattcaagactgatccacaatcaaattattcaaacagctctgaagat
gctcacagcaatggatcagaatctgagaaaaaaggtcaaaataatgatgacgacgatgaa
gatggtggtggtgttgaagacactgaagggtatgaagatcttggatcagatgcacaaaag
agaaaactacaaggtactgatgaggttgattatgaggatggtcctgaagaggaaacacat
gatggtgagctgtcagaggaaattgaaggtgatgaggatggcagtgatgttgatgccaat
gagaattataacaatgtgacagatgctaataattctgaaggacttgaaaaaccctccaag
tccaagactattgatgaaaaacaaaatttgaaacgagaaaagaaaaaatctgaaccaaca
acaaaaaaatatgacagggcaatttttgtggaagccaaagggaagcattttgagatccac
tttagatttactggtgaacctcacattttgttaactcagattgctcagaggacagccaag
aaggtttgcatccaaaattttggaaaggttggtgaatgtaaagctattacatgcaaagaa
agtggagtaatctactatggtaaagatggcagaaaaaggattgagatttcagcctcagag
aaagaacaaataccagcacttcagacatcaggggtacattttaaaacattttgggagttg
gaagatgatctggatgttaggtacatttattcaaacaacgtgcatgctatgctaaatgct
tatggggtggaagcagccagggaaaccatcatcagggaagtgcagaatgttttcaagtct
tatggtatatcagtaaatatccgacacttgacactcattgctgactttatgacgcacact
ggtagctatcgcccgatgaacagaacggggagcatagcagactctacatcccctttcatc
aaaatgtgttttgagacggctggcaaatttattgttgaagcagcttatcatgggcaagtg
gacaacttggagacaccatctgctagaatttgtcttggtttgccagtgaagatgggaact
gggtgccatgacttgatacagaagctggagatatga
DBGET
integrated database retrieval system
