Glycine soja (wild soybean): 114372395
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Entry
114372395 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114372395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114372395
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114372395
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
HECT type E3
114372395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
Arm
ARM_ARMC5
Adaptin_N
ARM_PUB
Motif
Other DBs
NCBI-GeneID:
114372395
NCBI-ProteinID:
XP_028185721
LinkDB
All DBs
Position
10:4555171..4564027
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AA seq
1557 aa
AA seq
DB search
MGSRGQKRPEMVDELPADKRACSSLDFRPSTSNSSVQTQMNSTVEAHDHDMDTSSSASAS
SQSEGEPEKDSAYGSCDSDDMEQHHSTLHEYHRQRLSSDHGKFKTIISSLSGLTEPSLQL
AVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAQHESNPDIMLFSIRAITYICDLYPRS
AAFLVRHDAVTTLCQRLLAIEYQDVAEQCLQALEKISREQPLACLQAGTIMAVLNYIDFF
STSTQRVALATVVNICKKLPSESPSPFMEAVPILCNLLQYEDRQLVENVATCLIKIVERV
AQSSEMLDELCNHGLIQQVTHLLSLNGQTSLSPLIYNGLIGLLVKLSSGSLVAFRTLYEL
NISSILREILSTFDLSHGVSTSLLVGGHCNRVYEALKLLNELLPVRAKDENDQLMLDKES
FLDNSPDLLRRLGMDVFPMLIQVFNSGASLYVCYGSLSVMYKLVSLSKSDMLVALLKNAN
ISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDDFLKLFVKEGVFFAIEALLTPERSSKL
MYPAFGGIQLSLDSSQKSSSRDALKCLCFAFSTGQSPTSLEARNCKLDKDSLYNLATHIK
NKFLAPELFDSEKGLTGILQNLRALSNDLLSMSTDSGALAVHEEKINNILYQIMDKLTGK
EQVSTFEFIESGVVKSLVNCLSHGQYIREKKRVHGVCNYNLVIEKRFEALASVCLCASQP
LSGETPLSMLIRNLQTALASLEAFPIVLSNGPKLRNSFATVPNGCSIPYPCLKVRFVKGE
GETFLNDYTEDFHTVDPFSSVHSIERYLWPKVSAKGTEHARSSSVQVVSQPESPSPLQSP
SNASSVPVEIPVILRTSDMMTDLPETQMEEAKLSQPRPGQAVNENAGESSSSGTQGYAEQ
ELQMNTEPNSKLEKQHPASCSNEAGQKLDFYLEGQHLDHKLTLYQAILHHIIKKNADSFS
SAKLWSQVHIITYRRDVESEDVIPPECHSSPQHFSDEKVLAYYQHTPFFSDMFSCELVSD
LEMSSPIYDILFLLKSLESMNRIIFHLMSRERICAFAQGKVDNLDSLKITVPSVPQIEFV
SSKLTEKLEQQMRDSLAVSICGMPLWCNQLMASCPFLFSFEARCKYFRLAAFGQPQVQPS
HNGSGTVSDRRLSPGGLPRKKFLVHRDRILESAAQMMDLHASNKVVLEVEYDEEVGTGLG
PTLEFYTLVCQEFQKSGLAMWREDDSSFTLKTNLQAEEIGVHSFYGLFPRPWSSMQDTSG
GIQFSEVTKNFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDIQSFDPGLGKV
LQEFQALVMRKKFMESVSGGNSELQYGLSFRDMSIEDLCLDFTLPGFPDIVLASGTDHTM
VNMRNLEDYVSLIVDATVRSGVSRQVEAFKSGFNQVFSIDHLRIFNEEELERMLCGEYDS
WAVNEFGDHIKFDHGYTASSPPIVNLLEIVREFDNGQRRAFLQFVTGAPRLPPGGLASLN
PKLTIVRKHCSNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgaggccaaaagcgtcctgagatggttgatgaactgcctgctgataagcgg
gcgtgcagttcattggattttagaccaagtacttcaaactcatcagttcaaacccagatg
aattcaacagtggaggcgcatgatcatgacatggatacttcctcatctgcttcggcttcg
agtcaatcagagggagagccagagaaggattcggcttatggatcgtgtgattcagatgac
atggagcagcatcacagcactctccatgaatatcacaggcagagactgtccagtgatcat
gggaaatttaaaactattatatctagcttgagtggtctgactgaaccctctcttcaatta
gccgtactaaccgaactttgtgaggttctgtcattttgtacagagggttcaatctccagc
atgacttcagacttgttatcaccactacttgtaaagctggcacagcatgagagtaaccca
gatataatgttgttttccattagggccatcacctatatctgcgatctgtatcctcgatca
gctgcttttcttgttcgtcatgatgctgttactactttatgtcaaagattattggcaatt
gagtatcaagatgtagctgaacagtgtctccaagcattggaaaaaatatcacgcgagcaa
ccacttgcttgcttacaggctgggacaattatggctgttctgaactatattgacttcttc
tcaacaagcacacagagagttgcacttgctactgtggtgaacatatgtaagaagcttcct
tctgaaagcccttcacctttcatggaggcagtgcctatactgtgcaatcttcttcagtat
gaggatcgacagcttgttgaaaatgttgctacctgcttaatcaaaattgtggagcgagtt
gcgcagtcctctgaaatgttggatgagctttgtaaccatggactgattcaacaggttaca
catcttttaagtttaaatggtcagacatcgctatctccattaatatacaatggattgata
ggattacttgtcaaactttcatctgggtcacttgtagccttcaggactttatatgaactc
aatataagcagcatactgagagagatattatctacatttgacctctcacatggagtatca
acttcactgcttgttggtggacactgtaatcgggtatatgaagcactcaaattgctaaat
gagcttctccctgtccgggctaaagatgagaatgatcaactcatgctagacaaagaatcc
tttctagataatagcccagatcttctgcgaagacttggaatggatgtgtttcccatgtta
atccaggtgttcaattctggtgcgagtttatatgtttgctatgggagtctatctgtaatg
tacaagttggttagtttgagcaaatctgacatgcttgttgcattgcttaagaatgccaat
atttcaagttttttggctggagtattcactcgaaaggatcaccacatgctaatgttagca
ttacaaattgctgagataatccttcaaaatttttcagatgatttcctaaagttgtttgta
aaggaaggtgtcttttttgccattgaggcactattaacaccagaaagatcttcaaagttg
atgtacccagcatttggtggcattcagctgtcattggactctagtcaaaagtcttcttca
agagatgccctcaagtgtttatgttttgcattttcaactggccaatcccctacatcctta
gaagccagaaattgcaaactggacaaagactctctttataatcttgcaacgcatataaaa
aacaaattcttagcaccagaattatttgattctgagaaaggattgactggtattctacag
aatctcagagcactttctaatgatttgttgagcatgtctactgacagtggtgctcttgct
gtgcatgaagagaagatcaataatatattatatcaaattatggacaagcttactggcaag
gaacaagtttctacttttgaatttattgaaagtggagtcgtgaaatcacttgttaattgt
ttatctcatggtcagtatatcagggaaaaaaagagagtacatggtgtttgtaattataat
cttgtcatagaaaaacgatttgaggctttggctagtgtatgcttatgtgcttctcagcct
ctctcaggtgaaacacccctttctatgttaatcaggaacttgcagactgcactggcttca
ttggaagcttttcctattgttctgagcaatggaccaaaactgagaaattcatttgctact
gttcctaatgggtgttccattccttacccttgcctgaaagttcgttttgtcaagggagag
ggagagactttcctgaatgactacactgaggattttcatactgttgacccattttcttct
gtgcattccattgaaagatatctatggccaaaggtcagtgcaaaaggcacagagcatgct
agatcgtcatctgtccaagtagtgtcgcaacctgaaagtccttctccccttcaatcacca
tcaaatgcaagttcagtcccagttgaaattcccgtaattttaaggacttctgacatgatg
acagatctccctgaaacacagatggaagaggcaaagttgtcacagcctagacctggtcaa
gcagtcaatgagaatgctggggaatcatcatcctctggaactcagggttatgctgaacag
gaactgcaaatgaatacagaaccaaactcaaaactagaaaaacagcatcctgcatcttgt
agcaatgaagctggtcaaaagcttgatttttacctcgaaggacaacacctggatcataaa
ttgactctatatcaggcaattcttcaccatataataaaaaaaaatgcagattctttttct
agtgcaaaactgtggagtcaagtgcacataataacctatagaagggatgtagaatctgag
gatgtaatacctcctgaatgtcattcttcaccccagcatttctctgatgaaaaagtttta
gcttattatcagcatactccttttttctcagacatgttctcttgtgaactagtttctgat
ttggagatgtccagtccaatttatgatattttgtttcttcttaaaagcttggaaagcatg
aacagaattatatttcaccttatgtcgcgtgaaagaatttgtgcttttgcccaagggaaa
gttgataacctggatagtctaaaaataacagttccttctgtcccacagattgagtttgta
agcagtaagttgacagagaagctagagcaacagatgagggactctttggctgtctccatt
tgtggtatgccattgtggtgtaatcaattaatggcttcatgtcctttcttatttagtttt
gaggcaagatgcaaatacttcagattggcagcatttggtcagccacaagtccaaccttct
cacaacggctcaggaacagtaagtgacaggcgactgagccctggtggattgcctcgaaag
aaatttttagttcatcgcgaccggattttggaatctgctgcacaaatgatggacctgcat
gccagtaataaagtggttcttgaggtggaatatgatgaagaagtgggcactggtcttgga
ccaactttggaattttataccttggtgtgccaggagttccagaaatctggcttggccatg
tggagagaagatgattcttcctttaccctcaagacaaacttgcaggctgaggaaatagga
gttcattccttttatggactctttcctcgtccatggtcatcaatgcaagatacatctggt
ggcatacagttctctgaagtaacaaagaattttttccttctaggccaagttgttgctaaa
gcacttcaagatggaaggatcttagatcttcacttctcaaaagctttctataaacttatt
cttggaaaggaactttctctctacgacatacaatcctttgatcctgggcttggtaaggtg
ctacaagagtttcaagcattagttatgaggaagaaatttatggaatctgtcagtggaggg
aattccgagttgcagtatggactaagctttcgagatatgagcattgaagatctttgtctt
gattttactcttcctgggtttcctgatattgttcttgcttcagggaccgatcataccatg
gtaaatatgagaaacttggaggattatgtttctcttattgtcgatgcaactgtgaggtct
ggagtttcaagacaagtggaagcttttaaatctggctttaaccaggttttctccattgat
catcttcggattttcaatgaagaagaacttgagcgaatgctttgtggagagtatgactct
tgggctgtcaacgagtttggagatcacattaagtttgatcatgggtatactgctagcagt
cctcccattgttaatttgttggagattgtccgagagtttgataatggacagcgacgagca
tttctgcagtttgtgacgggcgcacctcgccttcctccgggaggattggcatctctcaat
ccgaagttaactattgtccgaaagcattgtagcaaccgggcagacacagacctacctagc
gtgatgacttgtgcaaattatctcaagctgcctccgtactcatcaaaagaaaggatgaaa
gagaagctcttgtatgccataacagagggtcaaggatctttccacctttcataa
DBGET
integrated database retrieval system
