Glycine soja (wild soybean): 114372650
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Entry
114372650 CDS
T06057
Name
(RefSeq) DNA mismatch repair protein PMS1-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03430
Mismatch repair
gsj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114372650
03460 Fanconi anemia pathway
114372650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114372650
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114372650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Herpes_UL49_1
Motif
Other DBs
NCBI-GeneID:
114372650
NCBI-ProteinID:
XP_028186130
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Position
10:complement(1743943..1751025)
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AA seq
944 aa
AA seq
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MVVEAQIIKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQ
VIDNGCGISPNNFKVLALKHHTSKLAEFHDLQSLTTFGFRGEALSSLCALGNLTVETRTA
SEPVATHLTFDSSGVLVAERKTARQIGTTVMVKKLFSSLPVRSKEFSRNIRREYGKLVSL
LNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNIITVLGMNTFSCLEPVTLSIS
DSCKVEGFLSKSGQGNGRNLVDRQYFFVNGRPVDMPKVSKVVNELYRGANSKQYPIVILN
FTVPTRTYDVNVTPDKRKIFFSEENALLQALREGLQQIYSASNVCYSVNEVVLPAEKEAC
VELCSSHGKSPIVMKLLSPNGSRPQKEQCSESNNGSISLDEINAECNNDTISQDEHEEKH
ITHSKNASESINEYLYSDVDEGLIRENDGNLMNQEFTLRAHCTSKDDNSGRQSASPSSII
PDQTTLVSRTVESGSSSSKYSFNHSRHVQSTLNNFVSVNKRNRDSVIRALSEVPVLRNPH
CQLKTANTETHDLITRSSLCFDQCDELARASEIEALKQLNPDNVFHKNENSVSFKGDSSD
REPKSNMELDLKNNTPIGDTASINPSSIDMITADVFASDPPLHSSPVRLDSSKSSRKKIC
SNMQFSFQELKKRREKRLSLLQSSKFGCGKAKVKSCYSDATLELSRSEIAEQKERALAAA
ATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQ
QPLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPPGCRFKLKSVPFSKNTMFGI
EDVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAMLASRACRSSIMVGDALGRN
EMQKILEHMAELKSPWNCPHGRPTMRHLVELTKIHKSSELTMPI
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtagttgaagctcaaataatcaagcccatcggcaagggcatcgttcacagaatctgc
gccggtcaagtcatcctcgacctctcctccgccgtcaaggaacttgtcgaaaacagtttg
gacgccggcgccaccagcatcgaaatctccctcaaagacttcggcgaacagtggtttcaa
gtcatcgacaacggttgcggcatttccccaaacaatttcaaggttcttgcgctgaagcat
cacacgtcaaagttagcggaatttcacgatcttcagtctctgacgacttttggattccga
ggggaggcgctgagttcgctctgcgcgttggggaacttgacagttgaaaccagaacggcg
agcgaaccggtcgctacgcacttgacttttgacagttccggtgtccttgtggcggaaaga
aaaacggcacggcaaattggtaccactgttatggttaagaagttgttctccagtttgcct
gtgagaagcaaagagtttagtcgtaacatacgtagggaatatggcaagttggtttctctg
ttgaatgcttatgcccttatagcgaaaggagtccgttttgtctgcaccaacacgactggt
aaaaatgtgaggtctgtggttcttaaaacgcaaggaagtggttctcttaaggataacatc
ataacagtgcttggcatgaacactttcagctgcttagagcccgtgacattgtctatatct
gattcttgcaaggttgaaggatttctttctaagtctggacagggcaatggacgcaatttg
gtggatagacagtatttttttgtgaatggtagaccggtggatatgcctaaagttagcaaa
gttgtgaatgagttgtacaggggtgcaaattccaaacagtatcccattgttattttgaat
tttacggttcctacaagaacgtatgatgtcaatgtgactcctgacaagaggaaaatattt
ttttctgaagaaaatgccctattgcaagccctgagagagggattgcaacaaatttattct
gctagtaacgtctgttactctgttaatgaagttgtgttgcctgctgaaaaagaagcatgt
gttgagttgtgttcctctcatgggaagtctcctattgtaatgaaactattgtccccaaat
ggcagtcgtcctcagaaagagcaatgtagtgaaagtaacaatggcagtatttctttagat
gaaattaatgctgagtgcaacaatgatactatttctcaggatgaacatgaggagaaacat
attactcattccaaaaatgcttctgaatcgattaatgaatatctgtactcagatgttgat
gaagggctaattcgtgagaatgatgggaatttaatgaaccaggagttcacactcagagcg
cattgcacttcaaaggatgacaatagtggaagacagtcagcgagtcctagtagtattata
cctgatcaaactacccttgtctcaaggacagttgagagtggcagctcttctagtaaatat
tcatttaaccattcaagacatgttcagtccactcttaacaactttgtttctgtaaataaa
agaaatcgggatagtgtcattagagccttatctgaagtgcctgttcttagaaatcctcat
tgtcaattgaagactgcaaatactgaaacacatgacttgattacaagatcatcactttgt
tttgaccaatgtgatgaacttgctagggcgagcgagattgaagctttgaagcaacttaat
cctgataatgtcttccacaaaaatgaaaattcagtttcttttaagggtgactcctctgat
agagaacctaaatctaatatggaattagatctaaagaataatacacctataggggataca
gcatctattaatccttctagcattgatatgatcactgcggatgtttttgcctcagaccct
ccattacattcatcacctgtacggttagattcttccaagtcttccaggaagaagatatgc
tccaacatgcaattttcttttcaagagcttaagaaaagaagagagaagagactttctctg
ttgcaatccagtaaatttggatgtggaaaagctaaagtcaaaagttgctattcggatgca
actttggagctttcacgatcagaaattgcagagcagaaagaaagggccttggcagcagca
gctaccgaacttgaaagatttttcaagaaggaagacttcagcagaatgaaggtgattggg
caattcaatcttggatttatcatttgtaaattggatcaagatttattcattgtggatcag
catgctgctgatgagaagtataattttgagcgtctatcacagtcaaccatcttgaaccaa
caacctcttcttaggccaataaaattggagttatcccccgaagaagaaatagttgcttca
atgcacatggacattatcaggaagaatggatttaccttggaagaggatccaaatgcaccg
cctggatgccgttttaaattaaagtctgttcccttcagtaaaaacactatgtttggaatt
gaagatgttaaggagctgatctctatcctgtctgatggtgatggtcatgtggaatgttcc
atagttggtagctataaactggacacctcagattctgtttgcccttcaagagttcgtgca
atgttggcatcacgtgcatgtcgatcatcaattatggttggtgatgcacttggaagaaat
gaaatgcagaagatacttgagcatatggctgagctgaaatccccatggaattgcccccat
ggcagaccaaccatgcgccatttagttgaattgacaaaaattcacaagagctctgaactt
acaatgccgatctaa
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