Glycine soja (wild soybean): 114372849
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Entry
114372849 CDS
T06057
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114372849
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsj01002
]
114372849
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114372849
03036 Chromosome and associated proteins [BR:
gsj03036
]
114372849
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114372849
Peptidases and inhibitors [BR:
gsj01002
]
Metallo peptidases
Family M67
114372849
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114372849
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
114372849
BRISC complex
114372849
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
114372849
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
114372849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
Spc24
UPF0172
Motif
Other DBs
NCBI-GeneID:
114372849
NCBI-ProteinID:
XP_028186191
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Position
11:52690031..52695109
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AA seq
436 aa
AA seq
DB search
MSLTSVKMSEEVWLSCVTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASALADRMTTSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCYSEDVNKVGRIQVIAFQSSDGKHNHMSRPVPLSPVNRSPVIDIDSSPSSS
ENVSTRPGYFKAENAEQDTGDSRSVVVSKDGGRSDLGNFFANADANYLGRDKSGGNYHPN
NSDTNIVDVDAMDMSESMQEAMHRSNLDMSGAEFVRKEIPLYVLPALSLINIDSPLSSYT
DLQHVLFEEERNAYNQAILQNKRDGKVHPLTFIHHTSTYQASLCKLIEYCLSPAINALQD
RLRENEIRLAVLREEAKSLEAEAYRGSEASVGTPRRVASPVHRGGSSPGLRNLHDSPESL
GSRNVASPGSRSRKGY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagcgtgaaaatgtcggaggaagtgtggttgagctgcgtgactcatgca
ttgtccactgagaccgaagagattatgggccttcttcttggggacatccagcattcgaaa
aacgggagcgtgactgcattgatatggggggcgtctcctcagactcggtctgatcggcga
aaggatcgagtggaaaccaaccctgaacagttggctgctgcttctgccttggctgataga
atgaccacatccactggaagaacaaccagagtcattggttggtaccattcacaccctcac
attacagttctcccttcccatgttgatgtgcggactcaggcaatgtatcaacttcttgat
tctggatttattgggttgattttttcctgttacagtgaagatgtaaacaaggtaggaaga
attcaagtaattgctttccagtcatctgatgggaagcataatcacatgtcaagacctgta
cctctatctcctgtaaatagaagccctgttattgatattgattcatcaccaagttcctca
gagaatgtatcaacaagacctggttacttcaaagcagagaatgctgagcaggacactggc
gattcaagaagtgttgttgtcagtaaggatggggggagatcagacttggggaatttcttc
gctaatgctgatgccaactatctagggagagataaaagtggaggaaactaccatcccaac
aattctgacaccaacatagttgatgttgatgccatggatatgtcagaaagtatgcaggag
gctatgcatcgttccaatttggacatgagtggtgcagagttcgtaagaaaagaaattccc
ctatatgttttgccagccttgtctttaatcaacattgattcgccactatcatcatacact
gatctgcaacatgtactatttgaagaggagcgaaatgcatataatcaagccatcttacaa
aataagagggatgggaaagtgcatccactgactttcatacaccacacttcaacttatcag
gcttccttgtgcaagttgattgaatattgtttaagtcctgctataaatgcacttcaagat
cgactgagagagaatgaaattcggttagcagttctgagggaagaagccaaaagtctggaa
gctgaggcatatagagggagtgaagcaagtgtaggaactccacgtcgagttgcatctcct
gtacatcgaggaggttcctctcctggtctgagaaacttgcatgactcacctgaatcactc
ggctctaggaatgtagctagtcctggtagcaggagcagaaaaggatattaa
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