Glycine soja (wild soybean): 114372860
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Entry
114372860 CDS
T06057
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114372860
03083 Polycomb repressive complex
114372860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114372860
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114372860
Histone modification proteins
HAT complexes
HATB complex
114372860
HDAC complexes
Sin3A-HDAC complex
114372860
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114372860
PRC2.2
114372860
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114372860
Heterochromatin formation proteins
Other heterochromatin formation proteins
114372860
Chromatin remodeling factors
NuRD complex
114372860
NuRF complex
114372860
NuRF complex (fruit fly)
114372860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
WD_LRWD1
Beta-prop_SPT8
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
114372860
NCBI-ProteinID:
XP_028186209
LinkDB
All DBs
Position
11:6958086..6961501
Genome browser
AA seq
403 aa
AA seq
DB search
MAEEYEEEGGEIEQEFSVWKKNTPLLYDFFISHPLQWPSLTVHWLPSSPHPHSHPSFNLH
KLLLATHTSDGESNFLMLADAYLPTDTSQPIVASDPNYPVLPKVEISQRIPVDGEVNRAR
CMLQNPSIVAAKTCNSEVYVFDFTKEHGSECNPDLRLRGHDKEGYGLSWSPFKNGYLLSG
SHDHKVCLWDVPAAASQDKVLDAFHVYEGHENVVEDVSWNLKDENMFGSGGDDCKLIIWD
LRTNKPQQSIKPHEKEVNFLSFNPYNEWILATASSDTIVGLFDTRKLAVPLHVLTSHTDE
VFQVEWDPNHENVLASSGADRRLMVWDLNRVGDEQIEGDGEGGPPELLFSHGGHKGKISD
FSWNRNQPWVITSVAEDNSFHVWQMAESIYNDGDDDNMWTAND
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagtacgaagaggagggcggtgagattgaacaagagttctccgtttggaag
aagaacactcctctcttgtacgatttcttcatttctcaccctcttcaatggccttctctc
accgttcactggcttccttcctctccccatccccactcccacccttccttcaatctccac
aaacttcttctcgccactcacacttccgacggcgaatccaacttcctcatgctcgccgac
gcatacctccccaccgacacctcacaacccatcgtcgcctccgatccaaactaccccgtt
cttcccaaggtggagatttcccaaaggattcctgttgatggggaggtgaatcgagctcga
tgcatgctgcagaaccctagtattgttgctgctaagacttgtaattctgaggtttatgtg
tttgatttcaccaaggaacatgggagtgagtgtaaccctgatttgaggttaaggggtcat
gataaagagggttacggtttgtcttggagcccttttaagaacgggtatcttttgagtggt
tcgcatgaccataaggtttgcttgtgggatgtgcctgctgctgcctctcaagataaggtg
cttgatgcatttcatgtttatgagggtcatgagaatgtggttgaagatgtgtcctggaat
ttgaaggatgagaatatgtttgggtccggtggagatgactgcaaattgatcatttgggac
ttgcggacgaacaaaccccaacaatcaatcaaaccacatgaaaaggaggtgaactttctt
tctttcaatccatataatgaatggattttggctacagcatcttcagatacaattgttggc
ctctttgatacacggaagctggcagtgccgctacatgttttaactagccacacagatgaa
gttttccaggtagagtgggatcctaatcatgagaatgtgttggcatcttctggtgctgac
agacggctgatggtttgggaccttaacagagttggtgatgagcagatagaaggagatggt
gaaggtggcccccctgaactactcttctctcatgggggtcacaaagggaaaatatcagat
ttttcatggaacagaaatcagccatgggttatcacaagcgtagctgaggacaattctttc
catgtctggcaaatggcagagagcatttacaatgatggagatgatgacaacatgtggacg
gccaatgattaa
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