Glycine soja (wild soybean): 114373443
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Entry
114373443 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114373443
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114373443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114373443
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114373443
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114373443
Messenger RNA biogenesis [BR:
gsj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
114373443
DNA repair and recombination proteins [BR:
gsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
114373443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
CP2
Motif
Other DBs
NCBI-GeneID:
114373443
NCBI-ProteinID:
XP_028186707
LinkDB
All DBs
Position
11:32748388..32769985
Genome browser
AA seq
871 aa
AA seq
DB search
MSMETMRSVLKKYFRFSDFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKT
GIVVSPLISLMRDQVMALKQRGIKAEYLGSAQKDFTVHSKAEHGQFDILFMTPEKACTVP
SSFWSNLLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATEKV
QYDIIGSLKLNYPFVTIGSVDRTNLFYGVKLLNRGQSFIDELVREISKEVTNGGSTIIYC
TTIKDVEQIFKSFAEAGIEAGMYHGQMNGKAREESHRLFVRDELQVMVATIAFGMGIDKP
NIRQVIHYGCPKSLESYYQESGRCGRDGIASVCWLYYTRSDFAKADFYCGEVKSEKQRKA
IMESLLAAERYCVLTTCRRKFLLEYFGEKFPADRCGNCDNCKISRKERDMSREAFLLMAC
IHSCRGGWGLNMPIDVLRGSRSKKILDVQFDKLPLHGLGKNYPANWWKALGYQLISQGYL
KEILSGIYRTISVSSKGEQFLASSRPDYKPPLVLTLTAEMLGVEDNGNTKEEFKTLSTSE
SEGFSEAEGQLYQMLLEERLKLARSVGTAPYAICDDQTIKKIALPRPSTKARLANIDGVN
QHLVTKYGDHFLQVIQKLSQGLNLSLDGEARVATASLQTNEVRKVSLVTNKSNKLTPAKF
EAWKMWHEDGCSIHEIANFPGRSAPIKEQIVAEYLLEAAQEGLPFDWARFSEMIGLTQEI
ISEIQGAISKVGSTDKLKPIKNELPKEITYQHIKTYLTMRNCGISLEAIQSGSIQTEKDG
EPAHNASNLSGPTLETCHVERHCEDGISAISSTEKCNLEINEVPTLPVNGSEVQKLSLTS
EGGFTNKRHKVSETKEVNSTKLKATESSVVE
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggagaccatgcgctccgttctcaagaaatactttaggttttcggattttcgg
ccttatcagagagaagttattgagaaaattatcgagaaaagggattgtttggtagtcatg
gctactggtagtggaaagtccttgtgctatcaggtacctcctttggttgttaaaaagact
gggatagttgtgagccctctgatatctttgatgcgagaccaggtgatggctttgaaacaa
cggggcatcaaagctgaatatcttgggagtgctcagaaggatttcactgtgcactctaaa
gctgaacatggtcaatttgacattctgttcatgactcctgagaaggcatgcacagttcct
agcagtttctggtccaatttactaaaggctggaattagtctttttgctgttgatgaagcc
cattgcatatcagaatggggacatgattttagggtggaatacaagcatttagacaagtta
cgtgaggttttgctagatgttccttttgttggtctaactgcaactgctactgaaaaggtt
caatatgacatcatcggttccctaaagctgaattatccttttgttacgattggttcagtt
gatcgcacaaatcttttctatggtgtcaaactattgaaccgtggacaatcttttattgac
gagcttgtgcgagaaatttcaaaagaagtcactaatggtggttcaactataatttattgc
acaacaatcaaggatgtagagcagatattcaagtcatttgcagaagcaggcattgaggca
gggatgtaccatggccagatgaatggaaaagctcgagaggagtctcatagattatttgtt
agagatgaactgcaagtcatggtggccaccattgcctttggcatgggcatagataaacct
aacataagacaagtgattcactatggttgccctaagagtctagagtcctactaccaggaa
agtggacgatgtggtagagatggtatagcttctgtttgttggctttactacacaagaagt
gactttgccaaggctgacttttattgtggagaagtgaaatcagaaaaacaaagaaaagct
attatggagtcattgctggctgctgaacgctattgtgtgctgacaacctgcagaagaaag
ttcttgcttgaatactttggggaaaaattcccagctgatagatgtgggaactgtgataat
tgcaaaatctcaaggaaggagcgtgacatgtccagagaagcatttcttttaatggcttgc
attcattcatgcaggggtggatggggccttaatatgcccattgatgtcctgcgtgggtct
cgatccaagaaaattcttgatgttcagtttgacaagcttccacttcatggactggggaaa
aattatccagcaaattggtggaaagcacttggatatcaattgatttctcaaggttacttg
aaggagattcttagtggcatatacagaactataagtgtcagctcaaaaggagagcagttt
ttggcctcttctagaccagattataaacctcctttggttttgacattgactgctgaaatg
cttggtgtagaagataatggaaacacaaaagaagaattcaaaactttatctacttcagag
tcagaaggtttttcagaggctgaggggcagctctaccaaatgcttttggaagaaagatta
aagcttgcaagaagtgttggaacagctccatatgctatatgtgatgatcaaacgatcaag
aaaattgctttgccaagaccttctacaaaagcaagactagcaaacattgatggtgtgaat
cagcacctagtaacgaaatatggagatcattttcttcaagttattcagaaactgtcacaa
ggattaaacctatcattggatggggaagcaagggtcgcaacagcaagtttgcaaactaat
gaagtaaggaaagtatctctagtaaccaacaaatccaacaagttgacaccggcaaagttt
gaagcttggaaaatgtggcatgaagatggttgttctattcatgagattgctaactttcca
ggtagatcggctcctataaaagaacaaattgttgctgaatatctgctggaagctgctcaa
gaaggattaccttttgattgggctaggttcagcgagatgataggactaacacaagagatc
atatcagaaattcagggtgctatttcaaaagttggatctacagataagctgaaacctata
aaaaatgaattgccaaaagagataacttatcagcacatcaagacttatttgacaatgcga
aactgtggaatatccttagaagcaattcaatctggaagtatccagactgagaaagatggt
gaacctgcacacaatgcttcaaatttgtcaggtcctactttagaaacatgccacgtggaa
aggcattgtgaagacggcatttctgccataagttcaactgaaaaatgcaacttagaaatt
aacgaggtacctactctacccgtcaatggttccgaggtacagaagctttcattgaccagt
gaggggggattcacaaacaaacgacacaaagtcagtgaaacaaaggaagtaaattcaact
aaattgaaggctacagagagttctgttgtagagtag
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