Glycine soja (wild soybean): 114373564
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Entry
114373564 CDS
T06057
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114373564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114373564
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114373564
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
114373564
NCBI-ProteinID:
XP_028186844
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Position
11:complement(888270..894159)
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AA seq
894 aa
AA seq
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MDDRVKSEKRSRDRHLERDDKYHQDSDDIRHHRSDRNHKCDHKSRDRDRDRAYDREGIKD
RNRAYDREGSRDRDRAYDREGSKDRDRAYDREGSKDRDRAYDREGSKDRDRDYEREGSKV
RLKGKHDEGREDLVEPRLSSHSHKRKEREHSEDRDYEDKKIRISEERKEGRRERRKFGDK
VKKEEEEEEEEEEEEEEEDGNDNIRGIHEAKVKEEVTDGAHGSASSNGTVFIQNGALGSP
AVAPMSVPETSLAPPPSVPIKVSSNSTTNENKGISITRSHEVTGKSSTDGSSSTARKTGS
LSIDALAKAKKALQMQKELSEKLKKIPQLNKSSTQNSQGSSNLGSMNESAVPSSAAGVAS
KSSTSASLVHAANMSIFPSTAFAASANTPVIGTSAAGIPNATLPNWEAVRRAQELAARMG
FRQDPQFAPLINMFPGQMVTDVTLLQKPMKAPVLRLDAQGREIDEHGNVINVTKPINLST
LKVNINKQKKEAFEILQPVLDVDPESNPHFDASMGINKTKLLRPKRMNFQFVEEGKWSKD
AETIKLKSKFGEAQAKEHKAKLAQLAKAKAAPDINPNLIEITERVVIKEKPKDQIPDIEW
WDVPLLHSRNYGDIDNGTIGEDKLKIEKITFYVEHPRPVEPPAEAAPPPPQPLKLTKQEQ
KKLRTQRRIAKEKERQEMIRQGVIEPPKPKVKISNLMKVLGSEATQDPTRLEKEIRTAAA
EREQAHIDRNIARKLTPAELREKKEKKLFDDPNTLETLVSLYRINDLSHPKARFRVDVNA
QENRLTGCAVICDGISVVVVEGGSKSIKRYGKLMLRRINWSEVSKEKEENEDSDDDKPAN
KCVLVWQGSVAKPSFNRFSVHDCITEAAARKVFADAGVPHYWDQAVNYKEDEAI
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagagtcaaatctgaaaagagaagcagagatcgacacttggaacgtgatgac
aaataccatcaagattctgatgatatccgccatcatcgatcagacaggaatcacaagtgt
gaccacaaatcaagggacagggatagggatagggcttatgacagagaaggaatcaaggat
aggaatagggcttatgacagagaaggaagcagggatagggatagggcttatgacagagaa
ggaagcaaggatagggatagggcttatgacagagaaggaagcaaggatagggatagggct
tatgacagagaaggaagcaaggatagggatagggattacgaaagagagggtagcaaagtt
aggttgaaggggaagcatgatgaggggagggaagatttggtggagccacgactctcctca
cattctcataagcggaaagagagggagcacagtgaggacagggactacgaggataagaaa
attaggatttccgaggagaggaaggaagggagaagggaacggaggaaatttggggataaa
gtcaagaaggaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagatggt
aatgataatattagaggcattcatgaggccaaggtcaaggaggaagtcactgatggtgcc
catggctcagcttcttccaatggcactgtgtttatccaaaacggtgccctgggatcacct
gctgtggcccccatgagtgtgcctgaaacatctttggctcctcctccttctgttcctatc
aaggtatcttcgaattctaccacaaatgaaaataagggcattagtattaccaggtctcat
gaggttactggaaaatctagtacagatgggtcatcttcaactgctagaaaaactgggagc
ctctctattgatgccctagctaaggctaagaaagctttacaaatgcagaaagagttgtca
gaaaagctaaagaaaattcctcagttgaataagagttctacccaaaattcacaaggaagc
tctaacttgggctcaatgaatgaatctgcagtaccctcttctgctgctggagtggcatca
aaaagttccacgtcagcttctttggtccatgctgcaaatatgtcaattttcccctcaact
gcttttgctgcttctgctaatactccagtaattggcactagtgctgctggtattccaaat
gcaactctgcccaactgggaagctgtcaggcgtgctcaggagcttgctgccaggatggga
tttcgtcaagatccacaatttgctcctctgataaacatgtttcctggtcagatggtaaca
gatgttactctcctgcagaaacccatgaaggcccctgttcttcgtcttgatgctcaggga
cgggaaatagatgagcatggaaatgttattaatgtgactaagcccatcaaccttagcaca
ttaaaggtcaacattaacaaacaaaagaaagaagcatttgaaatactacaacctgtatta
gatgtcgatcctgaatctaatcctcattttgatgcaagcatgggtatcaacaaaacaaag
ctcctgcggcccaagaggatgaatttccaatttgttgaggaaggaaaatggtcaaaagat
gctgaaacaataaaattgaagagtaaatttggagaagctcaagcaaaagagcacaaggcc
aaactggcacagttggcaaaggcaaaggctgctcctgatataaatcctaacttaatagaa
ataacagagagagttgtaattaaagaaaagcccaaggaccaaattccagacattgagtgg
tgggatgtgccacttctgcattctcgaaattatggtgacattgataatggaaccattggc
gaagataaactgaaaatagaaaaaatcactttttatgtggagcatcctcgtccagttgag
ccacctgctgaggctgctcccccaccacctcaaccactcaagctaactaagcaagagcag
aagaaactccggacacaaagacgtatagctaaggagaaagagcgacaggagatgataaga
cagggtgtcatagaaccaccaaaaccaaaggtcaagattagcaatttaatgaaagtactt
ggctctgaagcaactcaagatcctactcggctcgaaaaggaaatacgtactgcagctgcg
gagcgtgagcaggctcacatagataggaacattgcacgcaagcttactcctgctgagctg
cgggagaagaaggagaagaagctgttcgatgacccaaatacattggagacacttgtctct
ctttacaggataaatgacctctcacatccaaaggccagattcagagttgacgttaatgct
caagagaaccgtttgactggatgtgctgtgatttgtgatggtattagtgttgttgttgtt
gaaggtggaagcaagtcaattaagaggtatgggaaacttatgcttagacgtattaattgg
agtgaagtttcaaaagagaaagaagaaaatgaagattcagatgatgacaagcctgccaat
aagtgtgttctggtgtggcaaggaagtgttgccaaacccagcttcaataggttcagtgtc
catgattgcatcaccgaagctgctgcccgaaaagtttttgcggatgctggcgttcctcat
tattgggaccaagccgtgaactacaaagaagatgaagctatttaa
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