Glycine soja (wild soybean): 114374003
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Entry
114374003 CDS
T06057
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114374003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114374003
03009 Ribosome biogenesis [BR:
gsj03009
]
114374003
04131 Membrane trafficking [BR:
gsj04131
]
114374003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114374003
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114374003
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
114374003
Membrane trafficking [BR:
gsj04131
]
SNARE
SNARE associated proteins
Others
114374003
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114374003
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114374003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
Viral_helicase1
NACHT
AAA_7
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Sigma54_activat
Zeta_toxin
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
114374003
NCBI-ProteinID:
XP_028187384
LinkDB
All DBs
Position
11:49410838..49416405
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AA seq
807 aa
AA seq
DB search
MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGD
TILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCV
VAPDTEIFCEGEPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSREN
PEAMDEDTVDDEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP
ESGDRTTTGSDPFAASAGGADEDDLYS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaaggcgaatcatcggacccgaaatcggggaagaaggacttctcaaccgcg
attctggaacgcaaaaagtcgccgaaccggcttgtcgtggatgaggctgtcaacgacgac
aactccgtggtcaccatgcatccccaaaccatggaaaagcttcagcttttccgaggggac
actatcctcatcaagggtaagaaacggaaggataccatttgcatagctcttgctgatgag
aactgtgaggagccgaagatcaggatgaataaagttgtgaggtcaaatttgcgggttcgg
cttggagatgttgtgtctgtgcaccagtgcccggatgttaaatatgggaaacgtgtgcac
attctgcctattgatgataccattgaaggtgtcactggcaatctgtttgatgctttcttg
aaaccctatttcttggaagcttaccgtcctgtcagaaaaggagatctatttcttgtccgg
ggagggatgagaagtgtagagttcaaggtggttgaaaccgatcctggagaatattgtgtt
gttgctccagacactgaaattttctgtgagggggagcctttgaaaagagaagatgaagag
agactggatgaagtcgggtatgatgatgtgggtggtgtcaggaaacaaatggctcagatt
cgtgagttggttgagcttccattgaggcatccacagctttttaaatcaattggtgtgaaa
ccacccaaaggaattttactttatggacccccaggttctgggaagacattaatagcaaga
gctgtagctaatgaaactggagcttttttcttttgtattaacggaccagagattatgtcc
aaacttgctggagagagtgaaagcaatctcaggaaagcgtttgaagaagcagaaaagaat
gcaccatccattatcttcattgatgaaattgattccattgcccccaagcgggagaagaca
catggtgaagttgaaaggaggattgtttcacaacttttgactcttatggatggattaaaa
tctcgtgctcatgttattgttattggagctactaatcgtccaaatagcattgacccagca
ttgagaaggtttggtagatttgatagggaaattgatattggtgttcccgatgaagttggg
agacttgaagtccttcgcatacatactaaaaacatgaagctatctgatgatgttgattta
gagagaattgcaaaagatactcatgggtatgttggtgctgaccttgctgccctttgcact
gaagctgctttgcaatgcattagggagaagatggatgtaattgacttggaggatgagact
attgatgcagaagtactgaattccatggcagttacaaatgagcatttccagactgccctt
ggaacaagcaacccatcagctttacgtgaaactgttgttgaagtgcctaatgtcagctgg
gaagacattggaggccttgaaaatgtcaagcgtgaactgcaagagactgtacaatatcca
gttgagcacccagaaaagtttgagaagtttggtatgtctccatctaaaggagtacttttc
tatggtcctccaggatgtgggaaaactttgttagccaaagcaattgctaatgaatgtcaa
gctaacttcatcagtgtgaaaggtccagaattgcttacaatgtggtttggtgaaagtgaa
gctaatgttagagaaatttttgacaaggccagacaatcggctccatgtgtcctcttcttt
gatgagcttgactctattgccactcagagaggaagcagtgttggggatgctggtggtgcg
gctgatagagttctaaatcaacttttgactgaaatggatggcatgtctgccaaaaagact
gtgttcataattggggcaactaacagacctgacatcattgacccagcacttcttcgacca
ggccgtctggatcaattgatctatattcctctccctgatgaggattcccggcatcaaatc
tttaaagcctgcttgaggaagtcacctatcgcaaaaaatgttgatttgagagcattggct
aggcacactcaagggttcagtggtgctgatattacagaaatatgccagcgagcatgcaaa
tatgccataagagaaaacatagagaaggacattgagcgagagaggaagagtagggaaaac
cctgaggccatggatgaagataccgtcgacgacgaagttgcggagatcaaggctgctcat
tttgaggagtcaatgaagtttgcacggaggagtgttagtgatgctgatattcgcaaatat
caggcatttgctcagaccttacagcaatcaagagggtttggaagtgaatttaggtttcca
gagtctggagataggactacaactggatctgacccctttgcagcttctgctggtggggct
gacgaagatgatctatatagttag
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