Glycine soja (wild soybean): 114374231
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Entry
114374231 CDS
T06057
Name
(RefSeq) cullin-4 isoform X1
KO
K10609
cullin 4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03420
Nucleotide excision repair
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114374231
09124 Replication and repair
03420 Nucleotide excision repair
114374231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114374231
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114374231
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114374231
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
114374231
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114374231
TCR (transcription coupled repair) factors
Cul4-CSA complex
114374231
Exosome [BR:
gsj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114374231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
114374231
NCBI-ProteinID:
XP_028187650
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All DBs
Position
11:40795539..40809777
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AA seq
788 aa
AA seq
DB search
MSLPTKRSSTAGSSLSPPPPMKKAKSLLLRSSSDDHDAVLDPSSMPLDDDLPNARAANLA
RKKATPPQPAKKLLIKLHKAKPTLPTNFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAV
NDLCLYKMGGNLYQRIEKECEAHISAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIR
GIALYLDRTYVKQTANVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIESERKGEAVD
RTLLNHLLKMFTALGIYAESFEKPFLECTSEFYAAEGVKYMQQSDVPDYLKHVEIRLQEE
HERCLIYLDASTRKPLIATAEKQLLERHIPAILDKGFAMLMDGNRIEDLQRMYSLFSRVN
ALESLRQAISSYIRRTGQGIVLDEEKDKDMVSSLLEFKASLDTTWEESFSKNEAFCNTIK
DSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEA
FYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQS
SQARTKLPSGIEMSVHVLTTGYWTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQN
SLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTGIEDKELRRTLQSL
ACGKVRVLQKLPKGRDVEDDDSFVFNEGFTAPLYRIKVNAIQLKETVEENTSTTERVFQD
RQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNN
PQIYNYLA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacggtcgagcaccgctggttcctccctgtcgccgccacctcct
atgaaaaaggccaagtccctcctcctccgctcctcctccgacgaccacgacgccgttttg
gacccttcctccatgcctctcgacgacgatctccccaatgcccgcgccgccaatctcgcc
cgcaagaaagccaccccgccccaacccgccaagaagctcctcatcaagctccacaaagct
aaaccaacattgcccacaaatttcgaggaggatacatgggcaaaactaaagtctgccatt
tgtgctatatttttgaagcaacctaactcttgtgacttggagaagctttatcaggctgtg
aacgatctctgcctttataaaatgggtggaaatctttatcaacggattgaaaaggagtgt
gaagcacatatatctgctgcactgcagtctttggttggccaaagcccagatttggttgtt
tttctgtctctagttgagagatgttggcaggatctttgtgaccaaatgttgatgattcgt
ggtatagccttgtatctagataggacatatgtgaagcaaacagcaaatgtccgatcatta
tgggacatgggcttacaacttttccgcaaacatctttcattgtctcctgaagtagaacac
aaaactgttacaggtcttctacgaatgattgaaagtgaaagaaaaggtgaagcagtggat
agaactcttctaaaccaccttttgaagatgtttactgctctgggaatttatgcagaaagc
tttgagaagccattccttgaatgcacatctgaattttatgctgctgaaggtgtgaaatac
atgcagcaatcagatgttccagattacttgaagcatgtggagatacgattgcaagaagaa
catgaaagatgtttgatctacttggatgcaagtactaggaagccattgatagcaacagca
gaaaaacaacttcttgaacgtcatatacctgccattcttgataagggctttgcaatgctt
atggatgggaatcgtattgaagaccttcagagaatgtactcactcttttcaagggtcaat
gccctcgagtcattgaggcaggccattagttcatatatcaggagaactggtcagggcatt
gttttggacgaggagaaagataaggatatggtttcatcccttttggaatttaaggcttct
cttgacacaacatgggaagaaagcttttccaagaatgaagcattctgtaacaccatcaaa
gattcgtttgagcatctcatcaatcttcgtcagaaccgacctgctgaattgattgccaag
tttttggatgagaaacttcgtgcaggtaacaagggcacttcagaagaagagttggagggt
acacttgataaagtccttgttttattcaggttcattcagggcaaggatgtgtttgaggca
ttttataagaaagatcttgcaaaaagactgttgttgggaaagagtgcttctattgatgca
gagaaatctatgatctccaagttgaagaccgagtgtggcagccagttcacaaacaaacta
gaagggatgtttaaggacattgaattatcaaaagaaataaacgagtccttcaaacagtca
tcccaggctaggacaaaactcccatccgggattgaaatgagtgttcatgttttgacaact
gggtactggacgtatccacccatggatgttagacttcctcatgaattgaatgtttaccag
gatattttcaaagagttctatctaagtaaatatagtggaaggcgtctgatgtggcaaaat
tcattaggtcactgtgtcttaaaggcagagtttcctaaagggaaaaaagagttggctgtc
tccctatttcagactgttgttctgatgttattcaatgatgctgagaaactaagctttcaa
gatatcaaggactctactggtatagaggacaaggaactgagaaggactctgcaatcactt
gcatgtggaaaagttcgtgtcctacaaaagttgccaaagggtagagatgtggaggatgat
gactcatttgtttttaatgaagggtttacagctcctctttatcgtataaaggtgaatgca
attcagttgaaggagacagtagaggagaacacaagcaccactgaaagagttttccaagac
cgtcaatatcaggttgatgctgctattgtgaggataatgaagactaggaaagtgcttagt
cacacgcttcttattactgaactcttccaacagctcaaatttccaataaaaccagctgac
ttgaagaaaaggatcgaaagcctgattgatagggagtatctggagagagacaagaacaac
cctcaaatatacaattaccttgcataa
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