Glycine soja (wild soybean): 114374342
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Entry
114374342 CDS
T06057
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114374342
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114374342
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
114374342
Protein phosphatases and associated proteins [BR:
gsj01009
]
HAD phosphatases
Fcp/Scp phosphatases
114374342
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
114374342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
114374342
NCBI-ProteinID:
XP_028187780
LinkDB
All DBs
Position
11:complement(42727397..42736328)
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AA seq
960 aa
AA seq
DB search
MPTSMVYHGEMAVGEVKIYPEENKNMDLKEIRISHFSQPSERCPPLAVLHTITSFGICFK
MESSTSQKRQQQDALFHLHSSCIRENKTAVMPVRGEEIHLVAMYSRNNDRPCFWGFIVAS
GLYNSCLTMLNLRCLGIVFDLDETLVVANTMRSFEDKIEVLHRKMNSEVNPQQISAMQAE
IKRYLDDKNILKEYAENDQVVDNGKVIKIQSESVPALSDSHQPIVRPLIRLQEKNIILTR
INPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPELNLI
NSKELLDRIVCVKSGLKKSLFNVFQNGLCHLKMALVIDDRLKVWDEKDQPRVHVVPAFAP
YYTPQAEASNAVPFLCLARNVACNVRGGFFKDFDDGLLQKIPLIAYEDDIKDIPSPDVSN
YLVSEDDASASNGNKNLLLFDGMADAEVERRLKDAISASSTILALTANIDPRLAFTSSLQ
YTMVSSSGTVPPPTAQASVVQFGNVQFPQPNTLVKPMSQVTHPGLSLHSSPAREEGELPE
SELDLDTRRRFLILQHGQDTRERMASEPPFPVRHPAQVSAPASSVPSRRGWFSVEEEMGP
QQLNLPVPKEFPVDSEPFHIEKRWPRHPSFFSKVGDSISSDRVFHESHQRLPKEVHHRDD
RSRLSQSLSSYHSLPGDDIPLSGSSYSNRDFDSESGRSLFHADTTAGVLQEIALNCGTKV
EFLSSLVASTELQFSIEAWFAGKKIGEGFGRTRREAQSKAAGCSIKQLADIYMSHAKDDS
GSTYGDVSGFHGSNNDGFVSSGNSLGNQLLPKEESGSFSTASESSRVSDSRLEVSKRSTD
SISALKELCMMEGLAASFQSPPASASTHLTQKDEVHAQVEIDGQIFGKGFGVTWEEAKMQ
AAKKALGSLRTMFNQGSLKRHGSPRSMQGLANKRLKPEYPPTLQRVPYSARYPRNAPLVP
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtctatggtgtaccatggagagatggcagtgggagaggtaaagatataccca
gaagagaacaagaacatggatctgaaagaaatcagaataagtcacttctcacaacctagt
gaaaggtgtccaccgcttgcagtgcttcacacaattacttcttttggtatttgcttcaaa
atggagtcatcgacctcacagaaacgacaacagcaagatgcactctttcatttgcactcc
tcatgtatcagagagaacaagactgctgtaatgccagtgcgtggggaagaaatacacttg
gttgcaatgtattcacggaataatgataggccttgtttctggggatttattgttgcctct
ggactttacaattcatgtcttacaatgttaaatctgagatgtttgggtatagtgtttgat
ctggacgaaacccttgtagtggcaaatacaatgcgttcttttgaggataaaattgaggtg
ctccatagaaaaatgaactctgaggtcaatccgcaacaaatttctgctatgcaggcagag
atcaagcgatatttagatgacaagaatatattgaaggaatatgctgaaaatgatcaagtt
gttgataatgggaaagtgataaaaattcaatctgagagtgttccagcattgtctgatagt
catcagcctatagttcgaccactgatccgattacaagaaaagaatattattctgacacgc
atcaatccacagattcgtgatactagtgttcttgtgaggttgagacctgcatgggaagat
ctccggagctacctgactgcaagagggcgcaagcgttttgaggtttttgtttgcacaatg
gctgagagggactatgcactagaaatgtggaggcttcttgatccagaattgaatttgata
aattcgaaagaactgctagatcgtattgtttgtgtcaagtcaggtttaaagaaatcattg
tttaatgtattccaaaatggcttatgccatctgaagatggcattggtaattgatgatcgc
ttgaaagtgtgggatgagaaagaccagcctcgggtgcatgttgtccctgcatttgctcca
tattacactcctcaagctgaagcaagcaatgcagtccctttcttgtgtcttgcaagaaat
gttgcttgcaatgttaggggtggcttcttcaaggattttgatgatggtcttttacagaag
atccctctaattgcttacgaagatgatatcaaagatataccttctcccgatgtgagcaat
tatctagtttcggaggatgatgcatctgcttccaatggaaataaaaatttgcttctattt
gatggcatggcagatgctgaggtagaaagaagattaaaggatgcaatatcagcttcttca
actatccttgcattgactgctaatatagatcctaggcttgctttcacttcttctcttcaa
tacacaatggtgtcttcttccggaacagttccacccccaacagcacaagcatctgtagtg
caatttggcaatgttcagtttcctcaacctaatactctagttaagcctatgagtcaagtt
acccatccaggactgagcttgcatagttctcctgccagagaagagggtgaattacctgaa
tcagaattagacctagataccaggcgtaggtttctcatattgcaacatggtcaagataca
agggagcgcatggcaagtgaacccccatttcctgttagacatcctgcacaagtttctgct
cctgcttccagtgtcccatcacgtaggggatggttttctgtagaagaggaaatgggtcca
caacaactaaatttgccagtacccaaagaattccctgtagattctgaaccatttcatatt
gagaagcgctggccccgtcatccatcctttttctctaaggttggcgattctatttcctct
gatagagttttccatgagagccatcaaagattgccaaaggaggtgcatcatagggatgat
cgctcaagattaagccaatcactctctagttatcattctttaccaggtgatgacattccc
ttgagtggttcatcttacagcaacagggattttgactctgaatctggacgttctctattc
catgctgatactacagctggagtattacaggaaattgcactgaattgtggaactaaagtg
gaatttttgtcttcgttagtggctagcacagaactgcaattctccattgaggcatggttt
gctggaaaaaagattggtgaaggatttggtagaactagaagggaagctcaaagtaaggct
gctgggtgttcaatcaaacaattggctgatatatatatgtctcatgctaaggatgattct
ggttccacttatggtgatgttagtgggtttcatggttcaaacaacgatggttttgtgagt
agtggtaattctcttggtaatcagctattgcctaaagaagagtcaggctcattttcaact
gcatctgagtcatctagggtttcagattctaggttggaagtctctaaaaggtcaacagat
tcaatttctgccctcaaagaattgtgcatgatggagggtcttgctgccagttttcaatct
ccaccagcttcagcatcaacacatttaactcagaaagatgaagtgcatgcacaggttgaa
atagatggtcagatctttggtaaagggtttggagtaacatgggaagaggctaaaatgcag
gctgccaagaaggcacttggaagtctaagaacaatgtttaatcaaggttctctaaagagg
catggttcgcccaggtcaatgcaaggattggcaaataaacgtctaaagccagaatatcct
ccaactctgcagcgggttccctattctgctagatatccccggaatgctcctcttgtccct
tga
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