Glycine soja (wild soybean): 114374653
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Entry
114374653 CDS
T06057
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114374653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114374653
03036 Chromosome and associated proteins [BR:
gsj03036
]
114374653
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114374653
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114374653
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
114374653
Noncanonical PRC1 (PRC1.1)
114374653
Noncanonical PRC1 (PRC1.3/1.5)
114374653
Noncanonical PRC1 (PRC1.6)
114374653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-C3HC4_5
zf-UDP
zf-RING_11
zf-RING_6
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
114374653
NCBI-ProteinID:
XP_028188121
LinkDB
All DBs
Position
11:complement(47076577..47083179)
Genome browser
AA seq
497 aa
AA seq
DB search
MPAQKRSLPESLDEGDTSQQNLFHSRHAKQQQQQPDQPQEHDEDENEEEEEEGDEEEGEE
EEEEEEEEEEEEEEEVEEAAQNDNNDEEKPQDSDDIPSSGSEEKPEFVYVELLEIRKDVQ
CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI
SALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGTFVTRSQR
NQRNRRQTQAIEGSEDNEEENDNNEKNSSSDDERSTEHRQRRRKRWARVRSSQPSSSMTS
PDGGCNDSDMDISRENRGISSRQVSKHGKLTWGRGGFRSNTRHGSGGSSNSKSSRSSRLS
KFVDHLRNLDENTDEFDVHLMLVSLDQQSTSSLQQPYLCCRPTLSVRHLYEHVARQTHLP
VEGIEILAVKGCCSTNRDKSTNENSALAYDELSTLVIDPHKDELEILQGHETLSGLRSKC
ISKMGHLIIAYNQKEVS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaagcgctctctgcccgagtcactcgacgaaggggacacttcgcagcag
aacctcttccattctcgacatgcgaagcaacaacaacaacaaccagaccagccgcaggaa
cacgacgaggatgagaacgaagaagaagaagaagaaggagatgaagaagaaggagaagaa
gaagaagaagaggaggaggaggaggaggaggaggaagaagaagaagtagaagaagcggcg
caaaatgacaacaacgacgaggaaaaaccacaggattccgacgatatcccatcttctggc
tctgaagaaaaacccgaatttgtgtatgtggaacttctggaaattcgtaaggatgtccaa
tgtccaatttgccttggtattattaagaagacaagaaccgttatggaatgcttgcaccgt
ttttgcagggaatgcattgacaaatcaatgcgactagggaacaatgaatgccctgcttgt
cgcacacattgcgccagtcgtcgttccttgagagacgatccaaattatgatgccctaatt
tctgctttatatccagatattgagaagtacgaagaagaggagcttgaatttcgtgaagag
gagaagaaccgcaataagcagattcaagcttcaatagcaaaagtagttcaacggcaatct
gaagcattggttaagagacgtaaagatacaccaggtacatttgtaacaagatcacagcgt
aatcaacgaaataggagacaaactcaagcaattgaaggatctgaagataatgaggaggaa
aatgacaataatgaaaagaactcatcttcagatgatgaacggagtacagaacaccggcag
agaaggcgaaagagatgggccagagttcgctcctctcaaccctcatcatccatgacaagt
cctgatggtggatgcaatgatagtgatatggatataagtagagaaaatcgtggaatttct
tcaaggcaggtatcaaaacatggaaagcttacttggggaaggggtggatttagaagtaac
actcggcatggtagtggtggcagtagcaatagcaaaagttctcgcagtagtcgattatct
aagtttgttgatcatctccgcaacttggatgaaaacactgatgagtttgatgtccatctc
atgcttgtttctcttgaccaacaaagtacatcaagtttgcagcaaccttacctttgctgt
cgaccaactttgtctgtcaggcacctttacgaacacgttgctcgtcagacacatttgcca
gttgaaggaattgagatactggcagtcaaaggatgctgcagtacaaaccgtgacaagtca
accaatgagaattcagccctggcatacgatgagctatcaacgctggttattgatccacac
aaagatgaactggaaattttgcaaggacatgagactctgtcagggcttagatccaaatgc
atatctaagatgggacatttgattattgcatacaatcagaaggaggtatcatag
DBGET
integrated database retrieval system
