Glycine soja (wild soybean): 114374936
Help
Entry
114374936 CDS
T06057
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114374936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114374936
Enzymes [BR:
gsj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114374936
Ubiquitin system [BR:
gsj04121
]
Ubiquitin ligases (E3)
HECT type E3
114374936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
114374936
NCBI-ProteinID:
XP_028188463
LinkDB
All DBs
Position
11:8233729..8244671
Genome browser
AA seq
1872 aa
AA seq
DB search
METRSRKRAEASSAAPSSPSSGPTTRSSKRARLSSSSSASAAVNTRSRASNTKEPLPPKN
PPPPLPPMDSANESSGSRRDRRNNKENSSDKGKEKEHDVRIRDRDAALNMDGSGGDEDDD
NDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSHQSGRLKKILF
GLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAAR
ALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISLEHPTACLRAG
ALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEH
ASVCLTRIAEAFASSPDKLDELCNHGLVTQATSLISNSSSGGGQASLSTPTYTGLIRLLS
TCASGSPLGAKTLLLLGISGILKDILSGSGVSSNASVSPALSRPPEQIFEIVNLANELLP
PLPHGTISLPIISNMFLKGPIVKKSPSGSSGKQEDTNGNVPEISAREKLLNDQPELLKQF
AMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWK
DPHVLLPALKIAEILMEKLPGTFSKMFIREGVVHAVDQLILASNSTNISTQASPAEKDND
SISGASSRSRRYRRRSGNSNPDGNPLDDLKTPVSVNVGSPPSSVDMPTLNSSIRLSVSTA
AKAFKDKYFPSDPGAAEVGITDDLLHLKNLCMKLNAGDDEQRTNGKGESKTSGFGPEEYL
IGIIANMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDRPLEAHLPKLRQQALTR
FKLFIAVALPSTIEVGTVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLS
ALSQPFKLRLCRAQGEKSLRDYSSNVVLVDPLASLAAIEEFVWPRIQRSESGQKSTVATG
NSESGTTPAGAGVSSPTTRRHSTRSRSSVNIGDTSRKEITQDKSTSSSKGKGKVVLKPAQ
EEARGPQTRNATRRRAALDKDAQMKPVNADSTSEDEDLDISPVEIDEALVIEDDDISDDE
DDDHEDVLRDDSLPVCSPDKVHDVKLGDLAEESNVAPATSDGQANAASGSSSKAGTVRGS
DSTDFRSGYNSSSRGAMSFAAAAMAGLGSANSRGIRGGRDRLGRPLFGSSNDPPKLIFTA
GGKQLNRHLTIYQAIQRQLVLDDDERFAGSSDYVSSDGSRLWGDIYTITYHRAENQTDRT
PPGGSTSNASKSCKSGSVSNSSSEAKLHQTSVLDSILQGELPCELEKSNPTYNILALLRV
LEGLNQLASRLRAQVVTDSFAEGKILDLDELSVTSGARVPTEEFISSKLTPKLARQIQDA
LALCSGSLPSWCYQLSKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNE
REVRVGRLQRQKVRVSRNRILDSAAKVMELYSSQKAVLEVEYFGEVGTGLGPTLEFYTLL
SHDLQKIILEMWRSGSSEKYQMKIDGDEKKMKRSEGSFVGDGELVQAPLGLFPRPWSANA
DASEGTQFFKVIEYFRLLGRVMAKALQDGRLLDLPMSVAFYKLVLGQELDLHDILFIDAE
LGKTLQELNALVCRKHYIQSTGGSYTDTFANLHFRGAPIEDLCLDFTLPGYPEYILKPGD
EIVDINNLEEYISMVVEATVKTGIMRQMEAFRAGFNQVFDISSLQIFSPQELDYLLCGRR
ELWKTETLADHIKFDHGYTAKSPAIVNLLGIMGEFTPEQQRAFCQFVTGAPRLPPGGLAV
LNPKLTIVRKLSSSAANASSNGNGPSELADDDLPSVMTCANYLKLPPYSTKEIMYKKLLY
AISEGQGSFDLS
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcttcctcagctgccccttcatccccttcc
tctggtcccaccactcgttcaagcaagcgcgcacgtctctcttcttcttcttccgcttcc
gccgccgtgaacactcggtcccgtgcatccaatactaaggaacccttgccccctaaaaat
ccccctcctcctcttcctcccatggactctgccaacgaatcctctggctcccgccgtgat
cgccgcaacaacaaagaaaactcctccgacaaggggaaggagaaagagcatgatgtcagg
attagggacagggatgcggcattgaacatggatggcagtggtggagacgaggacgatgac
aatgacaatgacagtgaaggcggtgtggggattttgcatcaaaacttgacctctgcgagt
agtgcacttcaggggcttcttcggaaactcggtgctggtttggatgatctgcttccatcg
tcggctatgggctctgcatcttcctctcaccagagtgggaggctgaaaaagatcctcttt
ggattgcgggcggacggcgaagaagggcggcaggtcgaagcattgacacagctctgtgag
atgctttcgattgggactgaagaatcgcttagtacattctctgttgattcgtttgttcct
gtgctcgtggggttgttgaatcacgagagcaaccctgacatcatgcttcttgctgccaga
gcattgacccatctctgcgatgtgctcccttcatcttgtgctgcggttgtgcattatggt
gcagtctcaatcttttgtgccaggttgctcacaatagaatacatggacttggctgagcag
tcccttcaagctttgaagaagatctctctggagcatcccactgcctgcctacgagcaggt
gctcttatggccgtgctttcttatttggacttcttttcaacaggagttcagcgggttgca
ttgtctactgctgcaaatatgtgcaagaagcttccttcagatgcagctgattttgtgatg
gaagctgttcctcttctgacaaaccttcttcagtaccatgattccaaggttctggagcac
gcctctgtttgtttgactcgaatagctgaagcttttgcatcatctccagacaaattagat
gagttgtgcaaccatggacttgtaacacaagctacctccctcatttctaacagcagttct
ggaggtggtcaggcttctctcagcacaccgacatataccggtttaatccgacttctttca
acttgtgcgagtggatcccctcttggagctaaaaccttattacttcttggaattagtggt
attcttaaagatattctatctggttctggagtttcttctaatgcctctgtttctcctgca
ttaagtaggccaccagaacagatatttgagattgtaaacctggcgaatgagcttctgccc
ccattgccacatggaacaatttctctccctatcatctccaacatgtttttgaaagggccc
attgtaaagaagtctccttctggtagctctgggaaacaagaagacactaatggaaatgtt
cctgagatatcggctcgtgagaaactattaaatgatcagcctgaactacttaagcaattt
gcgatggatctcctcccagttttaatacagatatatggttctagtgtcaatggtcctgtt
cggcacaaatgcctttctgtcattgggaaattgatgtatttcagcacggcagagatgatc
cagtctttgttgagtgtgacaaatatatcaagtttcttagctggcgtcctagcatggaaa
gatccacatgttttgcttcctgccttgaaaattgctgaaattcttatggaaaagcttccc
gggacattctccaagatgttcattagagaaggtgttgtgcatgcagtggaccaacttatt
ttagcctcaaattcaaccaatatctctacacaggcatctcctgctgagaaggataatgat
tctatatctggagcatcatctcgctctaggcgttatcggcgacggagtgggaattccaat
cccgatggaaatcctttggacgatttgaaaactccagtttcagtaaatgttggttcacct
ccaagttctgtggatatgccaacattaaattccagtattcggttatctgttagtacagct
gccaaagcttttaaagataagtactttccttcagatcctggggctgctgaagtgggtatt
actgatgatcttttgcatctgaaaaatctttgcatgaagttaaatgctggtgatgatgaa
caaaggactaatggaaagggggaatctaaaacttctggatttggtccggaagagtattta
attgggatcatagctaacatgctaaaggaacttggcaaaggagatggtgtatctactttt
gaattcattggtagtggtgttgttgcagctctgttgaattatttttcttgtgggtatttc
tctaaagatcgaccattagaagcccaccttcccaagcttcgccaacaagcacttacaagg
tttaagttatttatagcagttgcactaccttctactattgaagttgggactgtggctcct
atgactgtcttggtccagaagcttcaaaatgccttgtcctccttggagcgtttccctgtt
gtgctgagtcattcatctaggtcatctagtgggagtgcacgcctctcctctggactaagt
gctttatctcagcccttcaagttgcggctttgtcgagcccagggtgaaaagtcacttagg
gattattcatccaacgttgtactggttgatccattagcaagtttagcagcgattgaggaa
tttgtttggcctcgtatccaacgtagtgaatctggtcagaagtccactgtagccactggg
aattctgaatctgggacaactcctgcaggagctggtgtatcctctcctactacccgtcgc
cattctactagatccagatcatctgttaatataggtgatacatctagaaaggaaataact
caagataaaagtacaagttcttccaagggtaagggaaaagttgtattaaagcctgcacaa
gaggaggcaagaggacctcagaccagaaatgctactcgcagaagagcagctcttgataaa
gatgctcaaatgaagcctgtaaacgctgactctacttctgaggatgaagatttggatata
tcccctgttgagattgatgaggcattggtgattgaagatgacgatatttctgatgatgaa
gatgatgaccacgaagatgtactgagggatgattctcttcctgtttgttcacctgacaaa
gtacacgatgtgaaattaggcgacttagcggaggagagtaatgttgctcctgcaacaagt
gatggccaggctaatgctgcctcaggttctagtagcaaagctggtacagtcaggggatca
gactctactgattttaggagtggctataactcaagctcaagaggtgcaatgtcatttgct
gctgctgctatggctggacttggatctgccaatagcagaggtatcaggggtggaagagat
cgactagggcgtccattgtttggtagttctaatgatcctccaaagttgatatttactgct
ggtgggaagcagcttaataggcatttgactatttatcaggcaattcaaaggcagcttgtg
ctagatgatgatgaaagatttgctggcagtagtgactatgtatccagtgacggaagcagg
ttgtggggtgatatttatactataacttatcatagggctgagaaccagacagataggact
ccccctggaggttcaacctctaatgcttcaaaatcttgcaaatctgggtctgtatcgaat
tctagttccgaagccaagctgcatcagacatctgtactagatagtatcttgcagggagaa
ttgccctgtgaactggagaaatctaatcctacatacaatatattggcattattgcgggtg
cttgagggtttgaaccaacttgcatctcgtttgagggcccaagtggttactgatagcttt
gctgagggaaaaattttggatttagatgagctaagtgttaccagcggtgctagggttcct
acagaggaatttataagcagcaaacttactccaaaattagctaggcaaatacaagatgcc
cttgccttatgcagtgggagtcttccctcgtggtgttaccagttatctaaagcgtgccct
tttttgtttccttttgagacccggcgacagtatttttattcaactgcctttgggttatct
cgtgcattgtatcgccttcagcagcagcagggtgctgatggtcatggatcaacaaatgaa
agagaggtcagggttgggagattgcagcgtcaaaaggttcgtgtctctcgaaatcgcatt
ttggattctgctgctaaagtgatggagttgtattctagtcaaaaggctgtacttgaagta
gaatattttggtgaagttggcaccggtctgggtcccactctggagttctacacacttctc
agtcatgacttacaaaaaattatacttgaaatgtggagatcaggttcttcagagaaatat
caaatgaaaattgatggagatgaaaagaaaatgaaacgtagtgaaggctcttttgttgga
gatggagaacttgttcaagctcctcttgggctgtttcctcgaccttggtctgcaaatgct
gatgcatcagagggtacccaattttttaaagtgattgaatatttccgactattaggccgt
gtaatggctaaggctcttcaagatggacgcctattggatttaccaatgtcagtggcattt
tataagcttgttcttggtcaagagcttgatttgcatgacattcttttcattgatgctgag
cttgggaaaactttgcaagagttaaatgcccttgtttgccgaaaacattatatacaatct
actggtggtagctacaccgatacctttgctaatttgcattttcgtggggccccaatagaa
gatctctgcttggacttcacacttcctggttatccagagtacatcttgaaacctggagat
gaaattgttgacatcaataatctagaggagtacatatccatggtggttgaggcaactgtt
aagactggaatcatgcgtcaaatggaagcatttagagcagggttcaatcaggtttttgac
atctcatctttacaaattttttctccccaagaactggattacttgctttgtggccggaga
gaattgtggaagactgagacactagccgatcatataaaatttgaccatggttatactgcc
aagagccctgccatagttaatttactcggaattatgggagaattcacaccagagcaacag
cgtgccttctgtcaatttgttactggtgcacctaggttgcctcctggtggactggcagtt
ctaaatccaaaattaacgattgtgaggaagctttcatcaagtgcagctaatgcttcatct
aatgggaacggtccttcagaattagcggatgatgacttgccaagtgtgatgacgtgtgca
aattaccttaagcttcctccttattctaccaaggaaattatgtacaagaagctactctat
gcaatcagtgaaggccagggatcctttgatttatcgtga
DBGET
integrated database retrieval system
