Glycine soja (wild soybean): 114375238
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Entry
114375238 CDS
T06057
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114375238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114375238
03036 Chromosome and associated proteins [BR:
gsj03036
]
114375238
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114375238
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114375238
PBAF complex
114375238
GBAF(ncBAF) complex
114375238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
114375238
NCBI-ProteinID:
XP_028188811
LinkDB
All DBs
Position
11:complement(9058054..9065144)
Genome browser
AA seq
1047 aa
AA seq
DB search
MFGRQPSTTTVSLTQIFFFPNPPFLLLVSMEEKRRDAAPSAADSPASEPATSRRRAGANK
RKSGALSASGSSSAPSKRASRDKASPLHPPPLHNGPLTRARQTPNNLASASSSAGASAPA
AVKRSERAHPSAAESAALAEQLKKESEWETLEAAIEAEFEAIRSRGANAHVVPTHSGWFS
WSCIHPIEKQMLPSFFNSKTDNRTPDVYMEIRNWIMKKFHSNPNVQIELKDMSQLNVGDS
DARQEVMEFLDYWGLINFHPFPSMDSAMATGSDDGEAEKNSLLEKLYHFETLQLCPPVQR
SSQMTPATTSGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLC
TDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHV
GTKTKAQCILHFVQMPIEDTFVDCDDDVVAVCKETVDPVATNNDSSMDKDASECIENDTS
DGIKDNDKTSKAEDLEVKVNQEETTKLQEGSDEKSTEGTSKSEDAVKVKIDQEAGNDCAI
NALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGSDVAVASAHSSIKSMSRNS
PGTELAARCCFLLKDPPDNEKEPTNSERDSKSEGDQDEVNVKQDKPTLEDKDLPNDHSNT
KIETNALEVKGQPASTDDGALEKPISSKEQAVSNHEGGLDNGNDPNNAKLPNDQAPATLH
NSGGSTSKAEIPLCSDKAQEETLIEESCPSVKDKHVSDSLLSDTSKDAEMVSNSIPSTKS
KPQNPEPTNPACESLETTDSVMDVDGVSNSLPSEKIDSQPLITSKSSQCNGTEKDVDMMS
PSNPVVSNSGAENGPNTGAGKDHADNGAKVEDDGTETKQDSSFEKVKRAAVSTLAAAAAK
AKLLANQEEDQIRQLTSLLIEKQLHKLETKLAFFNDVENVVMRAREHVERSRHKLYHERA
LIIASRLGIPPSSSRGVPPSITTNRIPTNIANSLPRPQMMMNPPRPLISRPAGTVATTLQ
NPLVSSTAAGNSVRPSNQEKLSSVGTK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagacagcccagcaccaccacagtttcactcacccaaatattttttttccct
aaccccccttttctccttctcgtctcgatggaggagaaacgccgcgacgccgctccctcc
gccgccgattcgccggcatcagagcccgcaacctctcgccgccgcgccggagccaacaag
aggaagtccggcgccctcagcgcctccggttcctcctccgcgccctccaaacgcgcctct
cgcgacaaggcctcaccgctccaccctcctcccctccacaatggccccctcaccagggcc
cgccaaacccccaacaacctcgcctccgcctcctcttccgccggcgcttccgctcccgcc
gccgtcaaacgctctgaacgcgcccacccttccgccgccgagtccgccgcgctcgctgag
cagctcaagaaggagagcgagtgggagactctcgaggccgcgattgaagccgaattcgaa
gctatcagatctcgcggtgccaatgctcacgtggttcccactcacagcggttggttttca
tggtcatgtattcatccaattgagaagcaaatgttgccttctttctttaatagcaagact
gataatcggactcctgatgtatacatggagataaggaattggataatgaagaagtttcat
tcaaatccaaacgtacaaattgaattgaaagatatgtcacagcttaatgttggagactca
gatgctaggcaagaggtaatggagtttttggactattggggtttaattaacttccaccca
ttcccttcaatggattctgctatggccactggcagtgatgatggagaagctgaaaagaat
tcattgcttgaaaaattgtatcactttgaaactctccaattatgtccacctgttcaaagg
tctagccaaatgactccagctactacctctggcttgtttccggagtctacaattgctgaa
gagttggtgaaacaagaggggccagcagttgagatgcttgagtaccattgcaactcttgt
tctgctgattgttctcgcaaacgttaccattgccagaagcaggcagattttgatctatgt
accgactgctttagtaatagaagatttggctctggcatgtcttcgttggattttatactc
atggaaccagctgaagttgcaggggttaatggtggaaagtggactgatcaagagactctt
ctgctccttgaagcattagaactttataaagaaaattggaatgaaattgcagaacatgtt
ggaacaaaaacaaaagctcagtgcatattacactttgttcaaatgccaattgaggatacc
tttgttgactgtgatgatgatgttgttgctgtttgcaaagaaactgtggatccagttgca
acaaacaatgactcatctatggacaaggatgcttcagaatgtattgagaatgatactagt
gatggcatcaaagacaatgataaaacttccaaggctgaagatcttgaagtgaaagtgaat
caggaggagactacaaagttacaagaaggcagtgatgagaaatctaccgagggaacttct
aaatcagaagatgctgttaaggtaaagattgatcaagaagcaggcaatgactgtgctata
aatgctcttaaggaagcatttgcagctgttggttattctcctggacctgaaggcccttct
tcatttgctgaagtgggtaatcctgtcatggcactggcaactttccttgcacacttggtg
ggttctgatgtggctgttgcttcagctcatagctccataaaatccatgtcaagaaattca
cctggcaccgagcttgcggcaaggtgttgctttcttttaaaagatcccccagataatgag
aaggaaccgactaattctgaaagggattctaaaagtgagggagatcaggatgaagtaaat
gtaaaacaggataaaccaacattggaggataaagatttaccgaatgatcacagtaataca
aaaattgaaactaatgctttagaagtcaagggacagccggcttctacagatgatggagcc
ttggaaaaacccatttcttcaaaggagcaagcagtgagtaatcatgaaggtgggcttgac
aatggtaatgatcccaacaatgcaaagctacccaatgatcaagcaccagccactctgcat
aattcaggtggttcaacatccaaggctgaaattccactttgttctgacaaggctcaggag
gaaactttaattgaagaatcttgcccttctgtaaaagacaaacatgtgtctgattctctt
ctatcagacacatcaaaagatgctgaaatggtttctaattctattccctcaactaagagc
aagcctcaaaatccagagcctacaaatccagcttgtgaatctctagaaacaacggactca
gtaatggatgttgatggagtttctaattccttgccatcggaaaagattgactctcagcca
ctaattacgtcaaaatcatcccaatgtaatgggacagaaaaggatgtagatatgatgtca
ccttcaaatcctgttgtatcaaattctggtgctgaaaatggtccaaatacaggggcaggt
aaagatcatgcagataatggagcaaaagtggaagatgatggtactgagactaaacaggat
agcagttttgagaaagtgaaacgtgctgcagtttctacacttgctgcagcagcagcaaaa
gccaaacttctagcaaatcaggaagaagaccaaattcgacagcttacttccttgttgata
gaaaagcagttgcacaagttggaaacaaagttggcttttttcaatgatgtggagaatgtg
gtgatgagggcaagggagcatgtagagcgatcacggcataagctttatcatgagcgtgct
ttgataattgcatcacggcttggtataccaccttcctcatctagaggtgtaccaccatct
ataactaccaatagaattccaacaaatattgcaaactcactcccaagaccacaaatgatg
atgaatccaccaaggccactgatttctagacctgcaggcactgtagcaactactcttcaa
aacccattagtatcttcaactgcagcaggaaattcagttcggccatctaaccaggaaaag
ctttcttctgttgggacaaaataa
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