Glycine soja (wild soybean): 114375851
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Entry
114375851 CDS
T06057
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114375851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114375851
Membrane trafficking [BR:
gsj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
114375851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
114375851
NCBI-ProteinID:
XP_028189516
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All DBs
Position
11:complement(5988332..5997312)
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AA seq
794 aa
AA seq
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MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLME
RLSNYAASSADVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNRATKQIVALLSAPLEKYNDIMIALKLSNYPRVIE
YVDIRTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGIPNDELDEDDFKE
EQNSVSRLIQMLYNDDPEEMFKIIDTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGQ
EENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCELEPVAYEFF
TQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILN
KYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTPDPAANAFLASTMRYIEFQKQKGGA
VGEKYEAIKVSHAG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatgttggacggaaccgaagacgaagagaagtttctcgccgccggaatcgccggcctt
cagcagaattccttctacatgcaccgtgcattggactcgaacaatctcagggatgctttg
aagtattcggctcagatgctctccgagctcaggacttccaagctttctcctcacaagtac
tacgaactatacatgcgcgcctttgatcagttaaggaagctggagatgttctttgaggaa
gagactcgtcgcggttgctccattattgatctttatgaactcgtccagcacgccggcaac
attttgccccgattgtacctcctctgtacagtaggatcagtatacatcaaatccaaggaa
gctcctgcaaaggatgttcttaaggatcttgtggagatgtgccgtggcattcagcaccct
gttcgcggactctttctcagaagttacctttctcaagttagcagggacaaattgccagat
attggttcagagtacgaaggggatgcagatactgtagcagatgctgtagagttcgtgctc
caaaatttcactgaaatgaacaaactttgggtgcgaatgcaacatcaggggcctgcccgg
gagaaggagaaacgggaaaaggaaaggagcgagttgcgcgatcttgttggcaagaatctt
catgttctcagtcagatagagggtgttgacctagatatgtacaaagatgttgtgcttccc
agagtactggagcaggttgtgaattgcaaagatgagttagctcagttctacttgatggat
tgtataattcaagtcttccctgatgagtatcacttgcaaactcttgatgttttgttgggt
gcttacccccaacttcagccatctgtggacatcaagacagtactgtcccagttaatggaa
aggctttcaaattatgctgcttcaagtgcagacgtgttgccagagtttttacaagtggaa
gcattttccaaattaagcaatgccattggcaaggtgatagaggcacagcctgacatgccc
actgttggagttgtaactttatattcgtcccttctcaccttcactcttcatgtccaccct
gatcgacttgattatgcagatcaagttttgggagcatgtgtgaaaaaactctctggcaag
gggaaaattgaggacaacagggcaactaagcagattgttgctctattaagtgctccgcta
gagaaatataatgatattatgattgcattgaagctttcaaattatcctcgcgtaatagaa
tacgttgatattcgaactactaaggtcatggcaactgtcattattcaaagcattatgaaa
aacggaacacgcatttctacttcagaaaaggttgaagcattgtttgaactgataaagggg
cttatcaaggattctgatgggatccctaatgatgagctggatgaagatgatttcaaagag
gagcagaactctgtttcccgtctaatccagatgctttataatgatgatccagaagaaatg
tttaagatcattgatactgtgaggaagcacatactgactggaggaccaaaacgtctgcct
ttcactgttccacctcttgttttttcttctttaaagttggtcagacagttgcaaggtcaa
gaagaaaatccatttggagatgatgcatcaacaacaccaaagaaaatttttcagctttta
aatcagaccatcgagactttgtcaggtgtcctggcgccagaattagcattgcagttgtac
ttgcaatgtgctgaggctgcaaatgactgtgaattggagcctgttgcttatgaatttttc
acccaagcttatattctatatgaagaagaaatttctgattccagagcacagatcacagct
atccatttaataatagggactcttcaaaggatgcacgtctttggtgttgaaaacagggat
actttaacccacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatgc
agagctgtgtatgcatgctcacatctgttttgggttgatgatcatgataacatgaaagat
ggagagagggtcctattatgtcttaagcgggctttaagaattgcaaatgcagcccaacaa
atggcaaatgcagcacgaggtagcaccggatcagtaatgctcttcattgagatattgaac
aagtatctttacttctttgagaagggaaacctacaagtcaccgttgcggctatccagggc
ttaattgagttaattatgaatgaaatgcagagcgacaccacaactccagatccagctgcc
aatgctttcttagccagtactatgcggtatatagagttccaaaaacaaaaaggcggtgcg
gtaggtgagaagtatgaagccatcaaggtttcacatgctggataa
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