Glycine soja (wild soybean): 114375873
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Entry
114375873 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114375873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114375873
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114375873
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
FapA
DUF6306
Motif
Other DBs
NCBI-GeneID:
114375873
NCBI-ProteinID:
XP_028189540
LinkDB
All DBs
Position
11:12325050..12350050
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AA seq
761 aa
AA seq
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MSGFSFGSSSSQSSAFSFTNPSSSSSSPFSLSSTPAFSFGSSSLFTTNPTSAASSSPSPL
TFSFASSASPAPASAAAAASSIFGAATSASPLFSSPATAPSGASSSSAMTPSFGAAASSA
AASPFGGGTPSAKTTPFGAAASSVSTNLFGAGSSASTTLFGGVSSASTTPFGGAPSASLT
AFGGTPSAPTAPFGTASSTPTTTTSTTLFGGASSASATPFGVASSASTTPSGAASSASTT
PFGAPSSASLTAFAGTSSSSTLFGFSGTASATTPFGGSSSSSSTASASDSSSAFGASSSA
ATTPFGALNASSSAANSSPLFSGAFANTGASSSAASTTSFSGFAKPSTPAATTALSSSSG
LSLASQPSFGFPNAASASASSAASTASGTPAASRPSSGSTFSFTTSSAPLFSTVTTTTTA
STVSTGSTTLAPSVPAFGATGAASSAAASASATPVASTGAASSAASGGSSFTGFGVGSTA
TTASFGTGFSFSNKSSTVAVSSVTASAFGVSTSTSTAPAILSSSSSATPTSSALVVASTS
ETTSTVSTSVAAAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILNN
RDVLLRLEIEVAKVVETQSNLERQLELIETHQQEVDKALQSMEEEAECIYKDERGLLHDD
EAASTRDAMYEQSELIERELEQMTEQIKSVIQSLNSNQGGEHDTLDGMTPLDAVVRILNN
QLTSLMWIDEKAEEFSSRIQKLANPGSATDRELTGLGIWMS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttctccttcggatcttcttcttcccaatcttctgcattctccttcacaaac
ccttcttcttcttcttcttccccgttctcacttagctccacccccgctttctcatttgga
tcctcctctctcttcaccacaaaccctacctccgccgcgtcttcttcgccctctcctctc
actttctccttcgcttcctctgcctctcccgcacccgcatccgccgccgccgccgcttct
tcaatcttcggtgccgccacttctgcctcccccttgttctcttctcccgcaacggcgccg
tctggggcttcttcctcgtccgcaatgacgccgtcgtttggagcagcagcttcctccgcc
gcggcgtcgcctttcggtggcggaacgccctctgccaaaacgacgccgtttggagcagca
gcatcctcggtttcaactaatctgtttggagcagggtcctctgcttccactactctattt
ggtggagtatcctctgcttcaacgacgccgtttggcggagcgccctcagcttcattaacg
gcgtttggtggaacgccctcagctcctacggcgccgtttggcacagcttcctcaacgcca
acaacaactacatccacgactctgttcggtggagcgtcttctgcttcagcgacgccgttt
ggagtagcgtcctcagcttcaacgacgccgtctggtgcagcgtcttcagcttcaacgacg
ccgtttggtgcaccgtcgtctgcttcattaacggcgtttgctggaacgtcatcttcatcg
acactattcggattcagcggaacagcttctgcaacgacgccgtttggtggtagtagtagt
agtagtagtactgcctctgcctctgactcaagttcagcttttggagcatcttcttcagcc
gcaacgacgccgtttggagcgttgaatgcttcttcttcagctgcaaatagctctcctttg
ttctcaggtgcatttgctaataccggagcttcttcgtccgcggcctcaacgacgtcgttt
tcagggtttgcaaagccgtctactcctgccgctacaacggcgttgtctagctcttcagga
ctctccctcgcttctcaaccctcttttggatttcccaatgcagcttcggcttcggcttct
tcagctgcttccacagcttctggtacaccggcggcttcgaggccctcttcgggttcaact
ttttcgttcaccacgtcttcggcgccgctgttctcgacggtgacgaccaccaccaccgcc
tccaccgtgtctaccggcagcacgaccttggcgccttctgtgcctgcatttggtgctact
ggtgctgcatcttctgctgccgcgagtgcttccgcaactcctgttgcttctactggtgct
gcatcttctgctgccagtggaggatcgtcttttacaggatttggcgttggaagcacagcg
accactgcttcttttgggactgggttttccttttcgaataagtcgtcaacggtggcagtt
tctagtgttaccgcttctgcatttggggtgagcacttcaacctctactgctccagcaatt
ttgagttccagctctagtgcaactccgacatcatccgctcttgttgtggcttccactagt
gaaactacttcaactgtcagcacttcagttgctgctgcaccaaaattgccttctgaaatc
acagggaagacggtggaggagattatcaaggagtggaatgctgagttgcaagagcgaact
ggaaaatttagaaaacaagcaaatgcaatagctgaatgggatcgcaggattttgaacaat
cgtgatgttttattgagacttgagattgaagtggcaaaagtagttgagacacagtcaaat
ttggagaggcaattggagttgatagagactcatcaacaggaggttgataaggctttacaa
agtatggaggaagaagcggagtgtatttacaaggatgagcgtggattacttcatgatgat
gaagctgcatctacaagagatgcaatgtatgagcaatctgaattgattgaaagggaactt
gagcagatgactgaacaaatcaaatcagttatccaatcccttaattcaaaccagggtgga
gaacatgatacccttgatggaatgactccattagatgcagtagttcgaattctaaataat
caactaacttctctgatgtggattgatgaaaaggctgaagaattttcttcccgtattcag
aagctagctaacccaggttctgctacagatcgtgaactgacgggtctaggaatctggatg
tcctga
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