KEGG   Glycine soja (wild soybean): 114375942
Entry
114375942         CDS       T06057                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gsj04812]
    114375942
Cytoskeleton proteins [BR:gsj04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     114375942
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_EML Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 NBCH_WD40 eIF2A Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 114375942
NCBI-ProteinID: XP_028189611
LinkDB
Position
11:42945953..42957356
AA seq 824 aa
MAKRGYKIQEFVAHSASVNCLNIGKKACRLFITGGDDHKVNLWTIGKPTPITSLSGHTSP
VESVAFDSGEVLVLGGASTGVIKLWDLEEAKMVRTVAGHRSNCTAVEFHPFGEFFASGSM
DTNLKIWDIRKKGCIHTYKGHSQGISIIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARPEATGVRSIAFHPDGRA
LFTGHEDGLKVYSWEPVICHDTIDMGWTTLGDLCIHDGKLLGCSFYRNSVGVWVADISLI
EPYGTGLDPKKNESTEQKLGLQGSKLEKVEVNVGPTSGSRSMSPDESKEIKNIYIDSSGG
KPVTLQRSGSLSSTKVDLPEEFKEICNLGTMKQSPATGARVKSNEQAIRKSFIAPNIVPR
DTPDGKVSAKSEKETITFSKTKPGMLLRPAHVRRASTGRFDVDRFSEDVNSGTFCDTAIK
LDSTKEPKFQPNLGSQNEVKESCEDKHPIKSVTDKFDKTLSPSRFSEQTKCDESSLCKEE
ISPVKYVNGVAVVRGRTRSLVERFERRDKIQINEDQTTVFLPTINETREKVHNEDQIKAS
PTPVVFERRERIPFNEDRNNLPPLPKTISETDKSPNTVKVEPQIYKEDSNSANEEKIIEG
LMQTHDATLSNLRSRLTKLQVVRHFWERNDIKGATNALRKLPDHSVQADVISVLVERMEI
FTLDLFSCLLPVLTGLLDSKIERHVKVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQE
ERRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggcaaagcgtggatacaaaatacaggaatttgtggctcattcagcaagcgtcaattgt
ttaaatattggaaagaaggcgtgccgtcttttcattacaggaggggatgatcacaaggtc
aatctgtggactattggaaaaccaactcctataacgagtctatctggtcatactagtcca
gttgaatccgttgcatttgactcaggagaagtgttagttcttggtggagcatcgacgggt
gtgataaagctttgggatttggaagaagcaaagatggttcgcactgttgctggacacaga
tccaattgtactgctgttgagtttcatccctttggtgaattttttgcatctggctccatg
gacactaatctaaagatttgggacatcagaaaaaaaggatgtattcatacttacaagggt
catagccagggcatcagtattatcaaattcactccagatggccgttgggttgtttctggt
ggatttgataatgttgtgaaggtgtgggatctaacagctgggaagctcttgcatgacttc
aagttccatgaaggacacattagatcaatagatttccatccgcttgagtttcttctggct
acaggttctgcagatagaacagtgaaattctgggatttagaaacctttgaactgattgga
tctgctagacctgaggctactggggtacgctcaatagcttttcatcctgatggaagggcc
ctatttactggacatgaagatggtttgaaggtgtattcatgggaacctgttatatgtcat
gatactattgatatgggatggacaacacttggtgatctttgtattcacgatgggaaactt
ttggggtgctcattctaccgaaattctgttggagtttgggtagcagatatatcgcttatt
gagccatatggtactggcttggatcccaagaaaaatgaaagcacagaacaaaaacttggt
cttcagggaagtaaactggagaaagtagaagttaatgtaggaccaacctctgggtcgcgc
agcatgtctcctgatgagtcaaaggagataaagaatatatatattgactcttctggaggg
aaacctgttactttacagagatcagggtctttaagttcgacaaaagtagatctcccagag
gaattcaaggaaatttgcaacttgggaacaatgaagcagagtcctgcaacaggagctcgt
gtaaaatcaaatgaacaagcaattagaaaatctttcattgcaccaaacattgtacctcgg
gacactcctgatggtaaagtctcagcaaaatcagaaaaagagaccatcaccttttcaaag
acaaaacctggaatgctacttagaccagctcatgtaagaagagcatccacaggcagattt
gatgttgataggttttcagaagatgtgaattctggaactttttgtgatactgctattaaa
ttagacagcacaaaagaacccaaattccaaccgaatctaggatctcagaatgaagttaag
gaatcttgtgaggataaacatcctatcaagagtgttacagacaaatttgacaagactcta
tctccaagcagattttctgaacaaacaaaatgtgacgaatcctcactctgcaaggaagag
attagtccagttaaatatgttaatggagttgctgttgtacgaggaaggacccggtcattg
gttgagaggtttgagcgaagggataagattcaaatcaatgaagatcaaactactgtattc
ctccccacaataaatgaaacaagagaaaaagttcacaatgaagatcaaattaaagcatct
cctacacccgtggtatttgagaggagggaaagaattcccttcaatgaagatcgaaacaat
ttgcccccccttcccaagacaatatctgaaactgataagtctcctaacacagtgaaagtt
gagcctcaaatttataaagaggattcaaactctgcaaatgaagagaaaatcattgaaggt
ctgatgcaaactcatgatgcaacattgagtaatcttcgttcacgcttgacaaagttacag
gtggtgcggcatttttgggaacgcaatgatattaaaggtgctaccaatgctttgagaaag
ctgccagatcactctgttcaagcggatgttatcagtgtccttgtggaaaggatggaaatt
ttcaccttagatttattttcttgcttacttcctgtgctcacaggcttgctggatagcaag
atagaaagacatgtcaaggtatcactggatatgctgttaaaggtcgtagcagtttttggt
ccaacagtacttgcaactgtttcagcacctccctctgttggtgtcgatctacatcaagaa
gaaaggcgggaatgctgcaacaagtgctttatggaactacaaaagatccaaatgactctt
ccaatactgatacggaagggtggtatattagccaggtctgccttagagctaaatcttgtt
cttcagcagtcctaa

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