Glycine soja (wild soybean): 114376036
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Entry
114376036 CDS
T06057
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsj03016
]
114376036
Transfer RNA biogenesis [BR:
gsj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114376036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_4
Methyltransf_15
zf-CCCH
Ubie_methyltran
MTS
RRM_1
PCMT
Methyltransf_11
Ish1
PrmA
Motif
Other DBs
NCBI-GeneID:
114376036
NCBI-ProteinID:
XP_028189743
LinkDB
All DBs
Position
11:complement(17694398..17700002)
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AA seq
890 aa
AA seq
DB search
MTEPLSNTELSSSKTLDPTNRHDSTSESHQTAPEEVELNREDDVVPTAKRKRNDGVVEDR
LLHPLWKTSLCSYFRSHNGSCSHGGACRYAHGEEELRLRPDNTWDPTSERAKKALKTESD
DKRAVSEEVMMTEAVVDDGDADGDDGCGANHALSKCLVHLPRKWSSENFRTFLSEQGIAF
KHAKKKKGMMIGFVTFEDEEQLKSSTKELEGKSIGNKTVKVADVLPRSFEKKSNASVASH
QELDEGVDVASSGTLDGETNNDNLAKTRNVRDAVTPLAHMAYADQLEQKKSALMLILKKL
TRNARKACPNGVSLPEWILKSREIGGLPCKLEGIIASPIVNGYRNKCEFSVGYSLGGKVT
VGFMLGNFREGVTAVEEAVDCPNVSTIACKYATIFQEFLQDSDLPVWNRFKNTGFWRQLT
VREGRTNGNAVDAETFGGIAEVMLIVQVSTASFDDAKVAAEFKRLAQAFVVGATSHCSTL
PLTALVVQDHQGISNVAPADAPLHLLPIPKAAGDSEVDENNNAKDVRIHDYVNNLQFSIS
PTAFFQVNTLAAEKLYSLAGDWACLGPDTLLFDICCGTGTIGLTLAHRVGMVIGIEMNAS
AVSDAHRNAEINGIKNIKFICSKAEDVMGSLLREHLNVTKEQVDDPNISGKGNDSPEDSA
CPEPENGELASHCPENNNAEVGSEVQKGSTCEQADGISEQAEDVMGSLLRDDANMPKEQS
DYPNISGSGNDIPEDSTFPVPENGETTSHSESNNAEVGGEVQKGSTSRNGKTSLQQFKNV
VAIVDPPRAGLHPTVIKALRTHPGLRRLVYISCNPETLVANAIELCTPSPLKIEKGNKDN
RGWRNMSSAGLARHRAKSMPISEAFHPVKAMAVDLFPHTPHCELVMLLER
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacctctctcaaacaccgaactctcttcttctaaaaccctagacccaaccaac
cgccacgattccacttcggaatcgcatcaaacggctccggaagaggttgaactcaatcga
gaagacgatgtcgttccgaccgcgaaacggaagaggaacgacggcgtcgtcgaagaccgt
ttgctgcatccactgtggaagaccagcctctgctcctacttccggagccacaacggatcg
tgcagccacggcggtgcgtgtcgctacgcgcacggcgaggaggagctccgcctccgcccc
gacaacacgtgggacccgacctccgagcgcgcgaagaaggcgctgaagaccgagtcggac
gacaagcgtgctgtgtcggaggaagtaatgatgacggaggcagtagtcgacgacggcgat
gccgacggcgacgacggttgtggtgccaatcacgcgcttagcaaatgcttggtgcatttg
ccgcggaaatggagctctgagaattttaggacttttctcagcgaacagggtatagctttt
aagcatgctaagaaaaagaaaggtatgatgattggttttgttacttttgaagatgaagaa
cagttgaagagttcaacaaaggaattagaaggaaaatcaattggcaacaaaacggtaaag
gtggctgatgttcttcctcggtcatttgaaaagaaaagtaatgccagtgttgcatcccat
caagaattagatgagggggttgatgttgcttcaagtgggactttggatggtgaaacaaat
aatgataacttggcaaagacaagaaatgtgcgtgatgcagtgactcctctagctcatatg
gcctatgctgatcagttggagcagaaaaaaagcgctctcatgctgattctcaaaaaactt
actcgaaatgctcgtaaagcttgtccaaatggtgtttctcttcctgaatggattctcaag
tctagggaaataggtggtcttccgtgcaaactagagggtattattgcatctccaattgta
aatggataccgtaacaagtgtgaattttctgttggatattctctgggaggcaaagtgaca
gtaggcttcatgcttggaaacttcagggaaggtgtaacagcagttgaggaagcagtggac
tgcccaaacgtttcaacaattgcttgcaaatatgctacaatctttcaggaatttctgcag
gacagtgatttaccagtttggaacagatttaaaaatactggattttggcgtcaattgacg
gttcgagaaggaagaacaaatgggaatgctgttgatgctgagacttttggtggtattgca
gaggtcatgcttattgtgcaggtttctactgcaagctttgatgatgcaaaagtagctgct
gaattcaagaggcttgctcaggcatttgttgtcggagctacttcgcattgttcgacatta
ccccttactgctctggttgttcaggatcaccaaggaatatccaatgtggcgccagctgat
gcaccgctgcatttgcttcccattcctaaagcagctggtgattctgaggtggatgaaaat
aataatgccaaggatgtacgaatccatgattatgtcaacaatctccagttttctatatct
ccaacagcattttttcaggttaacactcttgctgctgagaagttgtactcacttgctgga
gattgggcatgcttaggtcctgacacactgctatttgatatatgctgtgggacagggaca
attggcttgacgttagcacatcgagttggtatggtgattggaattgaaatgaatgcttct
gctgtatctgatgcccataggaatgctgagattaatggcataaaaaacattaaatttata
tgttcgaaggcagaggacgtaatgggatctctgttaagggaacacctgaatgtgactaag
gaacaagttgatgatcctaatatctctggaaagggcaatgacagtcccgaggatagtgca
tgcccagaacctgaaaatggtgaactagcatctcattgtccagaaaataacaatgcagaa
gttggaagtgaggttcagaagggtagcacttgtgaacaagctgatggtatctctgaacag
gcagaggacgtgatgggatctctgttaagggatgatgcaaatatgcccaaggagcaaagt
gattatccaaatatctctggaagtgggaatgacattcctgaggatagtaccttcccagtg
cctgaaaatggtgaaactacatctcattcagaaagtaacaatgcagaagttggaggtgag
gttcagaagggtagcacttctagaaatgggaagacttcactgcaacagttcaaaaatgtt
gttgctattgttgatcctccacgtgctggacttcatccaactgtgatcaaagctttgaga
actcatcctggcctgcggaggcttgtttacatatcctgcaatcctgaaactttggtggca
aatgctattgagctttgtacgccatcccccttaaaaattgagaaaggaaataaagacaac
agaggatggagaaacatgagcagtgctggtttagcacggcacagggccaaatctatgccc
atctcagaggcattccatcctgtaaaggctatggctgttgatctttttccacatactcca
cactgtgaattggttatgcttcttgagaggtag
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