Glycine soja (wild soybean): 114376173
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Entry
114376173 CDS
T06057
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00900
Terpenoid backbone biosynthesis
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
Module
gsj_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
114376173
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gsj01006
]
114376173
Enzymes [BR:
gsj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
114376173
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
114376173
2.5.1.29 geranylgeranyl diphosphate synthase
114376173
Prenyltransferases [BR:
gsj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
114376173
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
114376173
NCBI-ProteinID:
XP_028189942
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All DBs
Position
2:40378752..40384965
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AA seq
395 aa
AA seq
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MEFTLPNLFPILMDSTSPMNDEPTLPSNSSFTFLVSVVPTKEHIVTTKEIQLQDTVLNFN
FKGYMIAKAHTVNQALDTAIALRDPHKIHEAMRYSLLAGGKRVCHMLCITTCELVGGTEA
TAIPAACTVEMIHTMSLIHDNLPCMENDDLRPEKPTKHDVAVLTGDVLLAFAFEHVAAST
EGVSLSPVVRAIEELAKSVGTEGIAFISRRSFGYPFSLNQMISLQGSVLVGSISYGKLLL
AGQMDRKYPEKHLVWYRVSCIIPQNKVDKDKREKPSSSSKKTVSECLEEKYFVGLDLSIR
RWLCSSLSENDDMIVFFKAMIVLAEIESLKVRALYQKGFALAEIESLKNLEEFIWFWCYC
VRKSKDLQNIYAQLLPLALPAPPMGGLGMPPMPPF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaattcactcttcccaaccttttccctatactaatggattcaacctctcctatgaat
gatgagcccacacttccaagcaattcatcatttactttcctcgtctctgttgtgcccact
aaggaacacatagtcacaaccaaggaaattcaactccaagacacggtgctcaacttcaat
ttcaagggctacatgattgccaaggcccacacagtaaaccaagccttggacactgccatt
gcgttgagggacccacacaagatccacgaagccatgcgctactccctccttgccggcggc
aagagggtctgccacatgctctgcatcaccacatgcgagctcgtcggtggcacagaggcc
accgccatccccgccgcctgcaccgtcgagatgatccacaccatgtcgctcatccacgac
aacctgccatgtatggaaaatgacgaccttcgccccgaaaagccgaccaagcacgacgtg
gcggtcctcaccggcgacgtgctcctcgccttcgcgttcgagcacgtggcagcgtccacg
gagggagtgtcactgtcacccgtggttcgagcgattgaggagttagcaaaatcggtcggt
acggaagggattgcctttatttctaggagatcatttggttatcctttttctctcaaccag
atgatctctctacaaggatctgtattggtgggatcaatatcatatgggaaactattatta
gctggtcaaatggatcgtaaatatccagaaaagcatcttgtgtggtatcgggtttcttgc
atcattccccaaaataaggttgacaaggacaagagagagaaaccttcctcgtcttccaag
aagacagtttctgaatgcttagaagaaaagtactttgttggccttgacttgtccatcaga
agatggttgtgtagtagtttgtctgaaaatgatgacatgatagtgttctttaaagcaatg
attgtactggcagaaattgagtctttaaaggttagagcactttaccaaaaggggtttgca
ctggcagaaattgagtctttaaagaatttggaagagtttatttggttttggtgttactgt
gttagaaagtcaaaagatttacagaatatatatgctcaattgttgcctctggctttgcct
gcaccaccaatgggtggattggggatgcctccaatgccacctttttag
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