Glycine soja (wild soybean): 114376563
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Entry
114376563 CDS
T06057
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114376563
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114376563
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114376563
03036 Chromosome and associated proteins [BR:
gsj03036
]
114376563
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
114376563
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
114376563
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
114376563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
114376563
NCBI-ProteinID:
XP_028190538
LinkDB
All DBs
Position
11:51779328..51787693
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AA seq
515 aa
AA seq
DB search
MNGGDEVVAAPAGPPHPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHGGSSRDLERVDYSIGRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQIANGALFLLSTNDKTIKFWKVQEKKVKKISEMNVDPSKSMGNGSIASSSNSSSSR
PYLANGGSPDRYNYISNDFSFPPGGIPSLRLPMVVSSHETSLVARCRRVYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTL
AYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILS
RDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRLATGSY
SNLFRVFGCAPGSAEATTLEASKNPMRRLVPTPSRPSRSLGNSITRVVRRGAETPGVDAN
GNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaggtcgtggcagctccggcgggtccgccgcaccctctggagtgg
aaattttcgcaggtcttcggagaacgcacggcaggggaagaggttcaggaagtggacata
atttcagctattgaatttgacaagtccggtgatcatcttgctactggtgatcggggtggt
cgagtggttctctttgagagaacagatacaaaagatcatggtggatcaagtagggatttg
gagagggtggactattctattggtaggcatcctgagttccgttacaaaacagagtttcag
agtcacgaaccagagtttgactatcttaagagtttggaaattgaagagaaaatcaacaaa
atcagatggtgccaaatagctaatggtgccctcttccttctttctacaaatgataaaaca
atcaaattttggaaggttcaagaaaagaaggtcaagaaaatttctgagatgaatgttgac
ccttcaaaatcaatggggaatggatctattgctagttcaagcaattcaagtagttctagg
ccatatcttgcaaatggaggatctccagatagatacaattatataagcaatgacttttca
tttccaccaggaggcataccatcactaagattacccatggtagtaagtagccatgaaacc
agcttagttgcccgatgccgtagagtgtatgcgcatgctcatgattatcacatcaattct
atttcaaataacagcgatggcgaaactttcatatcagccgatgatctgcgaataaatctt
tggaacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctgcaaatatg
gaggatctgacagaggttataacatcagcagaatttcaccctacacattgtaatacattg
gcatatagcagttcaaagggttcaatccgtcttgttgacttgcggcaatcagcattatgt
gattctcatgccaaactatttgaggaacaggaagctccagggtccagatcatttttcacg
gagattattgcttctatctcggacataaaatttgggaaggatggtagatacatacttagt
cgtgattacatgactttaaagttgtgggacattaatatggattcaggccccgttgcaact
ttccaggttcatgagtatttaagacccaagctttgcgatttatatgaaaatgactcaatc
tttgataagttcgaatgttgtctaagtggtgatggattgcgcttagcaactggttcttac
agcaatctatttcgtgtgtttggttgtgctcctggaagtgctgaggctacaactctagaa
gccagtaaaaatccaatgagacggctagttccaaccccttcaaggccttcgagatcactg
ggaaatagtataacacgtgttgtaagacggggagcagaaacccctggagtggatgctaat
gggaattcttttgatttcacaacaaagttgctgcacttagcatggcatccaagtgagaat
tcaattgcttgtgctgctgcaaatagcttgtacatgtactatgcgtaa
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