KEGG   Glycine soja (wild soybean): 114376665
Entry
114376665         CDS       T06057                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsj03036]
    114376665
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114376665
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114376665
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     114376665
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT TOR1L1_N HEAT_EF3_N UTP20_N HEAT_EZ
Other DBs
NCBI-GeneID: 114376665
NCBI-ProteinID: XP_028190676
LinkDB
Position
11:51989014..52001821
AA seq 1132 aa
MAETTQLTRHIESYVDSSSPTHQAASLNAIASLVNTDALTLEALIRELEMYLTTTDNVVR
ARGILLLAEVMTHIESKPLNSATIHSLVGFFKDRLADWRAVRGALVGCLALIRRKSVVGM
VTDSDATTIAQSFLQYMQVQSLGQHYDRKLCFELLDCLLERYFDAVTTLGEDLIYGICEA
IDAEKDPDCLKLAFHIVESLAQLNPDSSGLLASFAKDVFDILEPYFPIHFTRPSSGDTHV
QRDLSTSLMSAFSSTPLFEPFVIPLLLEKLSSSLHSAKIDSLKYLRVCSSKYGAGRIAKY
AGAIWSSLKDTLSTYLGEPDFSFTIAPVDGIGFPENEFVLEALSLLQQLIVQNSSLLVSL
IIDDEDVNSIFSTIASYETYDAIPVQEKKKLHAIGRILNITAKTTISSCNAVFESLFSRL
MDNLGFSVRFPNSDIPPSQRVKFGFLYVCIELLAGCRELIVGSDEPALQYVFEHETCCTM
LHRFSTPLFNAFGSVLAVSADRCPLDPDTYIGVKGLQILAMFGSDVFPIQKSVFENILKK
FMSIIVEDFNKTILWEAALKALYHVGSFVQKFHESEKAMSYRNLVVEKIVEILSLDDITL
PFSLELEALSNIGMTGMKNMLTILQGLGRAVFSNLSKVHVHRNLRSSDIAVQLLECYSCQ
LLPWIHENGGSEDFVMQFVVDIWSQAGNCMDFSTLFEEKGLLDAIMKAMKLSVGSCAVES
QNLIIQKAYCVLSSHTNFQQLKEVERLPLTPGNYNISLRDEGLISLFASVVIAVFPKTYI
PNKRVLMHLFIITLLRGGVVPVAQALGSILNKLVSTSNSAENSSDLTLEEALDVIFNTKI
SFSSTDNGRSNGNEMVLTDICLGIANDRMLQINAICGLSWIGKGLLLSGHEKIKDIIMIF
LECLISGTKSASPLIKDSLENTEEHIQDLLVMKCAADAFHVLMSDSEVCLNRKFHAMIRP
LYKQRFSSSVMPILQQIITKSHSSLSRSFLYRAFAHILSDTPMVAILSEAKKLIPVLLDC
LSMLTEDIQDKDMLYGLLLVLSGILTEKNGQEAAIENAHIIINCLIKLVDYPHKMLVRET
AIQCLVALSELPHARIYPMRTQVLRAISKCLDDSKRAVRHEAVKCRQTWAST
NT seq 3399 nt   +upstreamnt  +downstreamnt
atggcggaaaccactcaattgactcgccacattgagtcctacgtcgactcttcttctccc
actcatcaggctgcaagtctgaacgcaattgcatctctcgtgaacactgatgccttaact
ctagaagcactgatcagagagttggagatgtatttgaccacaacagataacgttgtacgg
gcaagaggaattcttcttctagcagaggtgatgactcatattgaatcaaaacctcttaac
agtgcaactatacatagtttggttggattcttcaaggacagactggcagattggagagca
gtgcgaggtgcacttgtgggttgcttggcactgataaggagaaaaagtgttgtgggtatg
gtaactgatagtgatgccacaaccattgctcagtcttttttacagtacatgcaagttcaa
tctttaggacagcattatgacaggaagctgtgctttgaactgcttgattgcctgctagaa
cgctactttgatgcagttactacactgggggaggaccttatttatggaatttgtgaagcc
atagatgcagaaaaggatccagattgtttaaagcttgcttttcatattgttgagtctttg
gcacaattaaatccagattcatctggtctacttgcaagctttgctaaagatgtttttgat
attttagaaccttactttcccattcactttacacgtccaagtagtggagatactcatgtg
caaagagacctgtcaacatctctgatgtctgcattctcttctacacctctctttgagccg
tttgtcattcctctgcttcttgagaaactttcttcttcactgcattcagcaaagattgat
tccttaaaatatcttagagtgtgctcttccaagtatggggcagggagaattgcaaaatat
gccggggctatttggtcttcattaaaagacaccctatctacttatttgggggagccggat
ttttcttttactatagcacctgtagatggtattggcttcccagagaatgaatttgtacta
gaagctctgtccctccttcagcagcttattgtgcaaaatagtagtttgttagttagcttg
ataattgatgatgaggatgtcaactctattttcagcaccattgcctcttatgagacttat
gatgctattcctgtgcaagaaaagaagaaactacatgctattggtcgtattctgaatatt
actgccaagactaccatttcttcttgtaatgctgtgtttgaaagtcttttctccagactg
atggataatttgggattttctgttaggtttccaaacagtgatattcccccctctcagaga
gtcaagttcggattcctttatgtctgcattgaactacttgcagggtgcagggaattaatt
gttgggtctgatgaaccagctctgcaatatgtttttgagcatgagacatgttgcactatg
cttcatcgtttttcaaccccattatttaatgcctttggttcagtcttggcagtaagtgct
gacagatgtcctcttgatccagatacatacattggagtgaagggtttgcagatacttgcc
atgtttggttcagatgtttttccaatacaaaaatcagtatttgagaatattttgaagaaa
ttcatgtcaattatcgtagaggatttcaacaaaacaatattatgggaagcagcattgaaa
gcattatatcatgtcggctcatttgttcagaagtttcatgagtctgaaaaagctatgagc
tacaggaatttagtcgtagaaaaaattgtggaaattctgtctcttgacgatattactctg
ccattttcacttgaattggaagcattatcaaatataggcatgactggaatgaaaaatatg
ctaaccattcttcaagggttgggaagagcagtattttccaatctatccaaggttcatgtc
catagaaatttaaggtcttctgatattgctgttcagcttttggaatgctattcttgccag
ttgctcccatggatccatgaaaatggaggttcggaggactttgtgatgcaatttgtggtg
gacatttggagtcaagcaggaaattgcatggatttcagtaccctgttcgaggaaaagggt
cttcttgacgcaataatgaaagcaatgaaactttctgtagggagttgtgctgtggagagc
caaaaccttataattcaaaaagcttactgtgtactatcatcacatactaactttcagcag
cttaaagaagtggaaagattacctctaactcctggaaattacaacatttcccttagagat
gaaggattaatttcattatttgcgtcagtagttattgcagttttccctaaaacatacatt
ccaaataaaagagtacttatgcatctatttataataaccctcctcagaggtggtgttgtt
ccagttgcacaggccttgggttccatacttaacaaattagtttcaacatccaacagtgca
gagaactctagtgatcttaccttggaagaagctctggatgttatattcaatacaaaaata
tcattttctagtactgataatggaagaagtaatgggaatgaaatggttcttactgatata
tgcttgggcatcgcaaatgatagaatgcttcaaatcaatgccatttgtgggctctcatgg
ataggaaaaggtttacttttaagtggtcatgaaaagattaaagacatcattatgattttt
ttggagtgcttaatatcaggcacaaaaagtgcctcgcctttgatcaaagattcacttgaa
aatactgaagagcatattcaagatcttttagtgatgaaatgtgctgctgatgcttttcat
gttcttatgagtgattcagaagtttgtttgaacagaaaatttcatgccatgatacgacct
ctatataagcagcgattttcctcttctgtgatgcctatcttgcagcagattattacaaaa
tctcactcctcattgtccagatcttttttgtatcgagcttttgcacatatcctgtctgat
actccaatggttgctatactgagtgaagctaaaaagcttataccagttctactggattgc
ttgtccatgttgacagaagatatccaagataaagatatgttatatggtctgctgctagtc
ttatctgggatattgactgagaaaaatggacaagaagctgccattgagaatgcacacatt
atcatcaattgtctgattaagcttgtggattaccctcataagatgcttgttcgagagaca
gctattcaatgtcttgttgccttgtccgagttgccccacgcacgtatctatcctatgagg
acacaggttctacgagcaatatcaaagtgtcttgacgattcaaagagagctgttcgccat
gaagctgtcaaatgtcggcaaacatgggcatcaacgtaa

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