Glycine soja (wild soybean): 114376760
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Entry
114376760 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114376760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114376760
03009 Ribosome biogenesis [BR:
gsj03009
]
114376760
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114376760
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114376760
Complex B
114376760
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114376760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
PRAI
AAA_22
DUF58
Motif
Other DBs
NCBI-GeneID:
114376760
NCBI-ProteinID:
XP_028190822
LinkDB
All DBs
Position
11:32233685..32244925
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AA seq
565 aa
AA seq
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MSYVPPHLRNPSSTTVATARTPSVTLDNHHHHHHKLAFASNTTTNCSPSLSSFHNNASRR
SSAAPPSPRILANPDTIFPQWQPSERVSRMTPEQIEEVRSRLNLDVAVASDSPPAPAPIE
SFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQ
HCLAQHPIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIEKQRSE
LRAGVEIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMRNLPEKH
QTLLFSATMPVEIEELSKEYLANPVQVKVGKVSSPTTNVSQTLVKISENEKIDRLLDLLV
EEASQAEKCGHPCPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGRSQSEREAALHDFR
SGSTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLATSFYTDR
DMFLVANIRKAIADAESGNTLTFATGKVARRKEKEAAAAQKEANIALSKQLGLGAASMNI
EDKYKFMITATNTKKEGAADSAWDD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccgcacctcagaaacccgagttccaccaccgtcgccaccgccaga
accccctccgtaaccctagacaaccaccaccaccaccaccacaagctcgcattcgcctcc
aacaccaccaccaattgctctccatctctctcctccttccacaacaatgcctctcgccgg
agctccgccgcgcctccctcgccgcggattctcgccaaccccgacaccatcttcccccaa
tggcaaccctccgaacgcgtttcccgcatgactccggaacagattgaagaggtccggtcc
aggcttaatcttgatgttgctgtcgcatctgactctcctcctgcacctgctccaatagaa
tcgtttactgatatgtgtttgcatccgagtatcatgaaggacattgcttaccatgaatac
accaggccaacttcgatccaggcacaggccatgccaattgctctcagtggaagggatcta
ttgggttgtgctgaaaccggtagtggaaagactgcagctttcacaattcctatgatacag
cattgcttggcccaacatcccattcggcgcaatgatggtcccctggcattagttttggct
cctacgagagaacttgctcaacaaatagaaaaagaggttaaagcttttagcagatctctt
gagtcattaaaaactgccatagttgtgggcggaaccaacattgaaaagcagaggtctgaa
ctaagagctggagttgaaatagcagttgccacccctggaagattcattgatcatttacaa
caaggcaacacttccctctccagaatttcttttgttgttctagatgaggcagatagaatg
cttgatatgggttttgaaccacagataagagaggtaatgagaaatcttccagagaagcat
caaacactgctgtttagtgcgactatgcctgtggagattgaagaattatcaaaagagtac
ttagctaacccagtgcaagtgaaggtggggaaagtgagtagcccaacaactaatgtttca
caaactcttgtgaaaatttctgaaaatgagaagattgatcggcttctagatttgcttgta
gaggaggcatcacaggccgaaaaatgtggtcatccatgtccattaacaattgtgtttgtt
gagaggaagacaaggtgtgatgaagttgctgaagcattggtagctcaaggattatctgca
gtttctcttcatggtggtcgcagtcagagtgaaagagaagctgccttgcatgattttcgg
agtggctccaccaacattttggttgccactgatgtcgcgtctcgtggcttggatgtcaca
ggagtgtcacatgtcattaatctagatcttccaaagaccatggaagattatgtacaccgg
attggaaggacagggcgtgcgggatcaactggcttagctacttcattttacactgatcgc
gacatgttcctcgtggcaaatataaggaaagcaatagctgatgcagaatctgggaacaca
ctgacatttgcaaccggaaaggttgctagaaggaaggagaaagaagcagcagctgcacaa
aaagaggcaaatattgctttatccaaacagttaggattgggagctgcttcaatgaacatt
gaagataaatataaattcatgattactgccacaaacactaaaaaagagggagcagcagat
agtgcctgggatgattaa
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