Glycine soja (wild soybean): 114376802
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Entry
114376802 CDS
T06057
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04142
Lysosome
gsj04144
Endocytosis
gsj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114376802
04142 Lysosome
114376802
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114376802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114376802
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsj04147
]
114376802
Membrane trafficking [BR:
gsj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114376802
Exosome [BR:
gsj04147
]
Exosomal proteins
Proteins found in most exosomes
114376802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114376802
NCBI-ProteinID:
XP_028190881
LinkDB
All DBs
Position
11:complement(4808475..4820838)
Genome browser
AA seq
1702 aa
AA seq
DB search
MAANAPIAMRETLTLASVGINPQFITFTHVTMESDKYICVRETAPQNSVVMIDMTMPMQP
LRRPITADSALMNPNTRILALKAQVPGSTQDHLQVFNIESKAKMKSYQMSQQVVFWKWIT
PKTLGIVTQSSVYHWSIEGDGEPVKVFDRTANLANNQIINYRCDPTEKWLVLIGIAPGSS
ERPQLVKGNMQLFSVDQQRSQALEAHAASFATFRVAGNDKDSTLICFASKSINAGQVTSK
MHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLE
TATAVYRNRISPDPVFLTTEASSDGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLELA
VSLAKRGNLPGAEELVVKRFQELFAQTKYKEAAELAAQSPQGVLRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTMGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQG
AVNFALMMAQMEGGCPIDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLEI
NLVTFPNVADAILANGMFSHYDCPRIGQLCEKAGLFIRALQHYTELPDIKRVIVNTHAIE
PQALVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYSEQLGVDACIKLFEQFKS
YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAK
LPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYV
VQRMDSDLWEKVLNPENEFRRQLIDQVVSTALPESKSPDQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEE
AFSIFKKFNLNVQAVNVLLDNLQTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDGIES
FIRADDSTHFLEVIKAAEDADVYHDLVKYLLMVRQNTKEPKVDSELIYAYAKIECLGEIE
EFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQ
YDEFDNAATTIMNHSPEAWDHMQFKDVIVKVASVELYYKAVHFYLKEHPDIINDMLNVIA
LRVDHTRVVDIMQKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYAEEEDYDRLRESIDLH
DNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDR
ELSEDLLVYFIEQGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYLLQFIREYT
GKIDELIKDKIEAQNEEKAKEKEEKEVLAQQNMYAQLLPLALPAPPMQGMGGGYAPSPPP
PMGGMGMPPMPPFGMPPMGGGY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaacgcccccatcgccatgcgcgagaccttaacgttggcaagtgtcggaatc
aacccgcaattcatcactttcacgcatgtcaccatggaatcggacaagtacatttgcgtc
agggaaaccgcgccgcagaacagcgtcgtcatgattgacatgaccatgccaatgcagcct
ctccgacgccctatcactgccgattccgctcttatgaaccctaacaccagaattctcgcg
cttaaagctcaagttccaggcagtactcaggatcatttgcaagtttttaacattgaatcc
aaagcgaagatgaaatcgtatcaaatgagccaacaggtggtgttttggaagtggataaca
ccaaagacactaggcatagtgactcagtcatctgtgtaccattggtcaattgaaggtgat
ggtgagccggttaaggtgtttgaccgaacagctaatttggcgaataatcagattatcaac
tatcgttgtgatcctactgaaaagtggttggttttgattggaattgcccccggttcttct
gagagaccgcaacttgtaaaaggaaatatgcaactcttctctgtggatcaacagaggagc
caggctcttgaagcacatgctgcctcatttgccacatttagggttgctggcaatgataag
gattcaactcttatttgttttgcatcaaaaagcatcaatgctggacaggttacgtcaaag
atgcatgtcatcgaacttggtgcccagccaggcaagccatcattttcaaaaaagcaagca
gatctcttcttccctccagactttgctgatgactttcctgtatcaatgcagatttcaaat
aagtatggcttgatatatgttatcacaaaacttgggcttttatttgtgtatgatctagag
actgccactgcagtttacagaaatcgaatcagtcccgatcctgtatttttgaccacagaa
gcatcttcagatgggggcttttatgctataaatagacgtggccaggtgttgctcgctact
gtgaatgaagcaaccattgtaccttttgttagtggccagttaaataatttggaacttgct
gttagtcttgctaaaagaggaaacctccctggtgcagaagaattggttgttaagcgtttt
caagaattatttgctcagaccaagtataaggaagctgcagagcttgctgcacaatcacca
caaggagtacttcgtactcctgacactgttgctaaatttcagagtgtacctgtgcaagct
gggcaaacgccaccgttattgcaatactttggaactctgttaaccatgggaaaactcaat
gcttttgagtcactggaactgtcacggcttgttgtaaatcagaacaaaaagaatctcttg
gaaaattggctagctgaggataaacttgaatgcagtgaggagcttggtgaccttgtgaag
acagtggataatgaccttgcattgaaaatttatattaaagctagagccacaccaaaagtt
gttgcagcttttgcggagaggagggaatttgataagatcctgatatattctaagcaggtt
ggatacacacctgattatatgttccttctccaaacaattttacgaacagacccccaggga
gctgtaaattttgctctgatgatggctcaaatggaaggaggatgccccattgactacaac
acaataactgatctctttcttcagaggaatttgatccgtgaggcaacagcctttttgttg
gatgtgctgaagccaaatcttcctgaacatggatatcttcaaacaaaggttctggaaatt
aatcttgtgacctttccaaatgttgctgatgctatattggccaatggcatgttcagtcat
tatgattgcccacgtattggacaactatgtgaaaaggcgggcctgttcatacgggctctt
cagcattatactgagttgcctgacatcaaacgtgtcattgtgaatacacatgccattgag
ccacaggctttagttgagttctttggaaccctttctcgagaatgggcactcgagtgtatg
aaagatcttttacttgtcaatcttaggggcaatcttcaaataattgtgcagactgctaag
gaatattctgagcagttgggtgttgatgcatgcattaaactctttgagcaattcaaatcc
tatgaaggactatactttttcttgggtgcatacttgagctccagtgaggatcctgatatt
cacttcaagtacattgaggccgctgctaaaactggacaaattaaggaggtagagcgtgta
actagagaatcaaacttttatgatgcggagaagacaaagaattttcttatggaggctaag
cttccggatgcacgtccattgattaatgtgtgtgatcgttttggctttgttccggatctc
acccattatctttatactagcaacatgcttcgctatattgaaggttatgttcaaaaggtc
aatcctggaaatgctcctctagttgtaggacagttgttagatgatgaatgccctgaagat
tttatcaaaggtcttatactttcagttcgctctctcctgccagttgagcctttagttgaa
gaatgtgaaaagaggaatcgtctccgattgcttactcaattcttggagcatcttgtaagt
gaaggaagccaggatgtacatgtacataatgccctgggtaaaatcattattgacagcaac
aacaatcctgagcattttctcacaaccaatccatactatgattctcgtgttgtcggtaaa
tattgtgaaaagcgggatccaacccttgctgttgttgcttaccgaagagggcaatgtgat
gatgagcttgttaatgttactaataaaaactccttgttcaaactccaagcaagatatgtt
gtgcaaaggatggactctgacctctgggagaaagttcttaatcctgagaatgagtttagg
cgacagttgattgatcaagtggtgtctactgctttgcctgaaagcaagagtcctgatcaa
gtttcagctgcagtgaaagcttttatgactgctgatcttcctcatgagttgattgagctt
cttgaaaagattgtgctacaaaattctgcttttagtggaaacttcaatcttcaaaatttg
ctgatccttactgcaatcaaggcagatccttctagagttatggattacataaataggttg
gacaactttgatgggcctgcagtaggggaggtggctgtggaagcacaactatatgaagag
gcattttctattttcaagaaatttaatttgaatgttcaggctgttaatgtcctactggat
aaccttcagactattgatcgcgctgtggagtttgctttccgggttgaagaagatgctgtt
tggagccaggtggctaaagcacaacttagggaaggcttagtgagtgatggaattgagtca
ttcattcgtgcagatgattcaactcatttcttagaggttataaaggctgctgaagatgca
gatgtataccatgacctggtaaagtatcttctcatggttaggcagaataccaaagagccc
aaggtggacagtgagctcatctatgcttatgctaagattgaatgccttggagaaattgaa
gaatttatactgatgccaaatgttgccaatttaccaaatgttggcgaccgcttgtatgat
gaggctttgtatgaggctgccaaaattatatttgcttttatttctaactgggctaagttg
gcagtcacattggtgaagcttaaacagttccaaggtgctgttgatgctgccaggaaagca
aacagttcaaaaacatggaaggaagtttgtttcgcctgtgttgatgctgaggaattccgc
ttagctcagatttgtggtctcaatgtcatcattcaggtggatgatttggaggaggttagc
gagtattatcaaaacagaggatgcttcaatgaactcatatctctaatggagagtgggtta
ggattggagcgtgcacatatgggtatctttactgagttgggagttctgtatgcgagatat
cgtcctgagaagctaatggaacacattaagttattctcaactcggcttaacattccaaag
cttattcgagcatgtgatgaacagcagcattggaaagagcttacttacctatacatccaa
tatgatgagttcgataatgctgcaaccaccataatgaatcactctccagaagcatgggac
cacatgcaattcaaagatgtgatagttaaagttgcaagtgtggagctgtactataaggct
gttcacttctacttgaaagaacatccagatataataaatgatatgttaaatgtgattgct
cttcgtgtggaccatactcgtgtagtagatattatgcagaaggctggccacctcagatta
gttaagccgtacatggttgcagttcaaagcaacaatgtgtctgctgtcaatgaggctttg
aatgaaatttatgctgaggaagaagactatgacagactccgtgaatcaatagatctgcat
gataacttcgatcagataggtcttgcacagaagattgagaagcatgaacttcttgagatg
aggcgtgttgctgcctacatttacaagaaagcaggaagatggaagcaatccattgctttg
tcaaagaaagacaatctttacaaggactgtatggaaacatgctctcaatctggtgaccgt
gaactctcggaagatttgcttgtctactttattgagcagggaaagaaagagtgttttgca
tcatgcctctttgtctgttatgatattatacggccagatgttgctcttgagctagcttgg
atgaacaatatgattgattttgcttttccatatctcttgcagtttattcgagagtataca
ggcaagatagatgagcttatcaaggacaaaattgaagcacaaaatgaggagaaagctaag
gaaaaggaggagaaggaagtacttgctcagcagaatatgtatgcccagttgctaccgctt
gctttgccagcacctcctatgcaaggaatggggggaggttatgccccttccccaccacca
cccatgggcggaatggggatgccaccaatgcctccttttggtatgcctccaatgggtggg
ggctactga
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integrated database retrieval system
