Glycine soja (wild soybean): 114377079
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Entry
114377079 CDS
T06057
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114377079
03083 Polycomb repressive complex
114377079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114377079
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114377079
Histone modification proteins
HAT complexes
HATB complex
114377079
HDAC complexes
Sin3A-HDAC complex
114377079
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114377079
PRC2.2
114377079
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114377079
Heterochromatin formation proteins
Other heterochromatin formation proteins
114377079
Chromatin remodeling factors
NuRD complex
114377079
NuRF complex
114377079
NuRF complex (fruit fly)
114377079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
114377079
NCBI-ProteinID:
XP_028191272
LinkDB
All DBs
Position
11:51679993..51684977
Genome browser
AA seq
453 aa
AA seq
DB search
MKEKEKVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRHRLYLSEQT
DGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKHKTILHPGEVNRIREFQQNN
KIVATHTDSPEVLIWDVETQPNRHAVLGATTSRPDLVLTGHKDNAEFALAMCPTEPFVLS
GGKDKCVVLWSVHDHISTLAVETASNVKQGSKTGGNNTKATESPCIEPRGIYQGHEDTVE
DVQFCPSSALEFCSVGDDSRLILWDARVGSAPVVKVDKAHNGDLHCVDWSPHDINFILTG
SADNTIHMFDRRNLTSSGVGSPVYKFEGHDAAVLCVQWSPDKSSVFGSTAEDGILNIWDH
DKVGKTTDSADSKASNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDCESSGGGGT
LQIWRMMDLIYRPEEEVLTELDKFRSHIFGCNS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaaagagaaggtggaggagaggtacactcagtggaagtctctggttcccgtt
ctctacgattggctcgccaaccacaacctcgtctggccttctctttcttgcagatggggt
cctcagctagagcaagccacttacaagaaccgccaccgtctctatctttccgaacagact
gatggcagtgttcccaatacccttgttattgccaactgcgaggttgttaaacccagggtt
gctgctgctgagcacatctctcagtttaacgaagaagcacgctctccctttgtcaaaaag
cacaaaactatacttcatcctggcgaggtgaatagaatcagggaatttcagcaaaacaat
aagatagtggccactcatacggatagtcctgaggtacttatttgggatgttgaaactcaa
cctaatcgtcatgctgttttgggggctaccacttcccgtccagacctggtattaactggc
cataaggataatgctgaatttgctctggctatgtgcccaactgaaccctttgttctttct
ggagggaaggacaagtgtgtggttttatggagtgttcatgatcatatttcaactttagca
gtagaaacagcatccaatgttaaacagggctctaaaactgggggcaataatacaaaagct
acagaaagcccttgtattgaaccaaggggcatttaccagggtcatgaggacactgttgaa
gacgtgcaattttgcccatcaagtgcgctggagttctgtagtgtaggtgatgattctcgc
cttatactctgggatgcacgcgttggatctgctccagttgttaaggttgacaaggcacat
aatggagatcttcattgtgttgattggagtcctcatgatataaattttatcctgactggt
tctgctgataatacaattcacatgtttgatcgtcgaaatcttacaagtagcggagttgga
tcacctgtctataaatttgaaggtcatgatgcagcagtcctctgtgtacagtggagtcct
gacaagtcatctgtatttggaagtactgctgaagatggtattttaaacatctgggaccat
gacaaggttggtaaaacaacagactctgctgattcaaaagcatcaaatgctccccctggt
ttattctttcgacatgctgggcatagggacaaggttgttgacttccactggaatgcatct
gatccatggacaattgttagtgtttctgatgattgtgaaagtagtggtggaggtggcacc
ctacagatatggcggatgatggatctaatatatcgaccggaggaggaggtgctcactgag
ctggataagttcagatcacatatttttggatgcaactcatga
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