Glycine soja (wild soybean): 114377289
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Entry
114377289 CDS
T06057
Name
(RefSeq) exosome complex component RRP45A-like
KO
K03678
exosome complex component RRP45
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114377289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114377289
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114377289
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114377289
NCBI-ProteinID:
XP_028191536
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Position
11:1049620..1052836
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AA seq
438 aa
AA seq
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MEQRLANTWRMPLNDKKFIETALLSDLRLDGRRPSDYRKLTVKLAKQDGSAEVHLGQTHV
MTFVTAQLVRPYRDRPNEGSLSIFTEFSPMADPSFDPGRPSDAAVELGRVVDRGLRESRA
IDTESLCVLSGKLVWAIRVDIHILDNAGNLVDAANIAALASLLTFRRPECSLAGEDGQDV
VVHPPEERDPIPLIIHHLPIAVTFGFFSNENLLVIDPTHHEECVMTGRMTATLNSNGDVC
AIQKPGGESVSHSVIMHCLKLAHVKATDITTKIRDAVEIHNNERALRKIKRHSSSVAVDV
CGEKQNQLDASHLDKLKLEEEEESPMECEASPSGQEQSKDGVSKNFTGGPSSWDPYSECV
NSDLLKASLASRGPSVPSKQKDSRRETKPKEPPLEIKTDSTPINKALTAGQNNKGKTLKD
AVKPKHKKKKIVSSNNEN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcggttagcaaacacatggagaatgcctcttaacgacaagaaattcatagaa
actgctctcctttccgacctccgactcgacggccgtcgcccctccgactaccgcaagctc
accgtcaagctggccaagcaagacggctccgcggaggttcatttgggccaaacccacgtt
atgaccttcgtcaccgcccaactcgtccgcccctaccgagaccgccccaacgagggctcc
ctctccatcttcaccgagttctctcccatggccgacccctccttcgaccccggccgcccc
tccgacgccgccgtcgagctcggccgtgtcgtggaccgtggcctccgcgaaagccgtgcc
atcgacactgaatcgctctgcgtcctctccggcaaactcgtctgggccattcgcgtcgat
atccacatactcgacaatgccggaaatctcgtcgacgctgcaaatatcgccgcgttggct
tctctgttgactttccggcggccggaatgctcgttggccggagaagacgggcaggatgtg
gtggtgcatcctcccgaggagcgcgacccgattccgttgattattcatcatcttcccatt
gctgttacctttggatttttcagcaatgaaaatctcctcgtgatagatccgacgcaccat
gaagagtgtgtgatgacaggccgcatgactgccacgcttaattcaaacggcgacgtttgt
gcaattcaaaagcctgggggagagagtgtctctcatagcgttatcatgcactgcttgaaa
cttgctcatgttaaagctactgatattacaactaagattagggatgccgttgaaatacac
aacaatgaaagggctttacggaagattaaacgccattcttcgtctgttgctgtggatgta
tgtggggaaaaacaaaatcaattggatgctagtcatttggacaaattgaagctggaagaa
gaagaagaaagtcctatggaatgtgaagcctcaccatcaggacaagagcaaagtaaggat
ggagtctcaaagaatttcaccggtggtccctcgagttgggatccctactcagagtgtgtc
aattcagatcttctaaaagcttctctagcttcacgcggaccgtcagttcctagtaaacaa
aaggattcaagacgtgaaactaagcccaaggaaccaccactggaaattaagacagattct
acaccaattaacaaggctctaactgctgggcagaataacaaaggtaagactctcaaggat
gccgtcaagcccaaacacaagaagaagaaaatagtatcttccaataatgaaaattaa
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