Glycine soja (wild soybean): 114377362
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Entry
114377362 CDS
T06057
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsj04131
]
114377362
Membrane trafficking [BR:
gsj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
114377362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
114377362
NCBI-ProteinID:
XP_028191640
LinkDB
All DBs
Position
11:complement(2433706..2441264)
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AA seq
1423 aa
AA seq
DB search
MASNPPFPMEDQTDEDFFDKLVEDDMEPVKSGHDEGYDSDEAKAFANLGINDVDAAAFEN
SNAAESGVEVKGEFSNVESDVGLEQEGNLMPVVSSVGFDGKVDPREDGIGMGSEVTSASA
SAVGTSDTAGSSGIKEVGWNSFHADLNGGGGLGSYSDFFSDLGDQSGDFTGNVYDNLSSE
VKPDSAVQNDGLNASGNYVQYHEGQGYDGSLENRSNWQGDGLNASVNHVQYQEDQAYVAS
SEEHTNGQDLSSSQYWEDLYPGWKYDHKTGQWYQIDGNSATATTQQSSEANTAADWTAAS
DRETEISYMQQTAQSVVGTLAETGTTENVSSWSQVSEGNHGYPEHMVFDPQYPGWYYDTI
AQEWRSLETYNSTIQSSGHGHENGNASANTFSPNDHSLYSEYSQADNYGQQGFDNQAVDG
SWSGLYGTNHKQGFDMYTTGSATTRGDSITSGGNQQINHSYGSSISVNEHQQNTSSSFGS
VALYNRVNHDRGLANGTFEPQSFGPTGDTVQQFNYSTTKFSEQKVFSNDFTENQKPFSYS
PQSIQGGHQYSHAPHVGRSSAGRPSHALVTFGFGGKLIIMKDPNLLSSSYGSQNSVQGSV
SVLNLIEVVMGNMDSLSIGDNTSNYFHALSQQSFPGPLVGGSVGSKELYKWLDERIAHCE
SPDMDYKKGERLRLLLSLLKIGCQHYGKLRSPFGTDTILKEYDTPESAVAKLFASAKTSG
TQYGMPSHCLQNLPSEGQIRAMALEVQNLLVSGKKKEALQCAQEGQLWGPALVLASQLGE
QFYVDTVKQMALRQLVAGSPLRTLCLLIAGQQAEIFSTDTSISGHPGASDMSQQSPQVGS
DGMLDDWEENLAVITANRTKSDELVIIHLGDCLWKERSEITAAHICYLVAEANFESYSDS
ARLCLIGADHWKCPRTYASPEAIQRTELYEYSKVVGNSQFTLHPFQPYKLIYAFMLAEVG
KVPDSLKYCQALLKSLKTGRAPEVESWKQLALSLEERIRIHQQGGYAANLAPAKLVGKLL
NFFDSTAHRVVGGLPPPAPLPSQGTIHGSEQQYQNMAPRVSSSQSTMSLAPSASMEPISE
WTADNNRMAKPNRSVSEPDIGRIPRQETTSPDAQGKAQASGGTSRFSRFGFGSQLLQKTV
GLVLKPRSGRQAKLGEKNKFYYDEKLKRWVEEGAEVPAEEASALPPPPTTAAFQNGSTEY
NSRFALKTESSPPIEGSNIRTASPELSPGMPPIPPSANQFLARGRLGVRSRYVDTFNQGG
GTSANLFQSPSVPSVKPALAANAKFFVPTPAPSSNEQAMDAIAEGKQEDSATNEYPSTSA
TNDWSYRSPKHVSSTAIQRFPSMGNISKQGATEGSNSHLPHSRRTASWSGSFNDSFTPQK
MGNMKPLGEALGMPLSRYSPDESSMHKPVKSSSYGEDLHEVEL
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccccatggaggatcagacggatgaggatttctttgataaa
cttgttgaggatgatatggagcctgttaagtctggccatgatgaagggtatgattccgat
gaggctaaagcatttgcaaatctgggaatcaatgatgttgatgctgctgcatttgagaat
tctaatgctgctgagagtggtgttgaagtcaaaggggaattcagtaatgtggaatccgat
gtaggacttgaacaggaggggaatttgatgcccgtggtgagttcagttgggtttgatggt
aaggtggatccccgtgaggatgggattgggatgggatccgaagtcacgtccgcttcagct
tcagctgtaggcacgagcgatacagctggtagttctgggattaaggaggtgggttggaat
tcttttcatgctgatttgaatggaggcggcggtttgggatcatattctgactttttcagt
gacttgggagatcagtctggggattttacggggaatgtgtatgataatttaagtagtgag
gtgaagcctgatagtgcagttcaaaatgatggcttaaatgcctcgggtaattatgtgcaa
tatcacgagggtcaaggttatgatggatctttagaaaaccgctcaaactggcaaggtgat
ggattaaatgcttcagttaatcatgtacaatatcaagaagatcaagcttatgttgcatct
tcagaagaacacacaaatggacaggatctgagtagtagtcagtattgggaggatctttat
cctggctggaagtatgaccacaagaccgggcaatggtatcaaatagatggcaatagtgca
acagcaactactcagcaaagctctgaagccaatacagctgcagattggactgccgcatct
gatagggaaacagagatctcttacatgcagcaaactgctcaatctgttgttggaacttta
gctgaaaccggtacaactgaaaatgtgtctagctggagtcaggtttcagaagggaatcat
gggtatccagagcatatggtttttgatcctcagtatcctggttggtattatgacacaatt
gcccaagaatggcgttcattggaaacttacaattcaaccatccagtcttctggtcatgga
catgaaaatgggaatgcttctgccaatacattctcacccaatgatcatagtttgtatagt
gaatacagccaagctgataattatggacaacagggctttgataatcaggctgtagatggc
agctggagtggtttgtatggcactaaccataagcagggttttgacatgtacacaactggg
tctgccacaacacgaggggatagtataacttctggtggcaaccaacagattaatcattct
tatggttcaagtatttctgtgaacgaacatcaacaaaatacttctagttcttttggatcc
gttgcattgtacaatagagtaaaccatgatcgtggtttggctaatggaacttttgaacca
caaagctttggccctactggggacactgttcaacagtttaattattcaaccacaaagttt
agtgaacaaaaagttttttcaaatgattttactgaaaatcaaaaaccctttagttattct
ccacaatcaattcagggtggacatcagtattcacatgcccctcatgttgggagatcatca
gctggacgtccttctcatgctttggtaacttttggatttgggggaaaactcatcataatg
aaagatcctaatcttttgagctcatcatatggaagccagaattctgtacaaggttctgtt
tctgtgttgaacttgattgaagttgtcatgggaaatatggattctttgagcatcggagat
aacaccagtaattatttccatgctctgagccagcaatcattcccaggtccgttggttggc
gggagtgttggaagtaaggaactgtacaaatggttagatgagaggattgcacactgcgaa
tcacctgacatggattataagaaaggtgaaaggttgagactccttctttccttgcttaaa
atcggttgtcaacattatggaaagctacgttctccatttggcacggacaccatactaaaa
gaatatgatactcctgaatcagcagttgcaaaactttttgcatctgccaagacgagtggc
actcaatatgggatgccaagccactgcttgcaaaatttgccttctgaaggacaaattagg
gcaatggctcttgaggttcaaaatcttcttgtctctggcaaaaaaaaggaggctttacag
tgtgcacaagaaggacaattgtggggacctgcacttgttcttgcttcacaacttggtgaa
cagttctatgttgatacagtgaagcaaatggcacttcgccagctagttgcaggatcacct
ttgcgcacattatgccttctaattgctgggcaacaagctgaaatattctctactgatacc
tcaattagtgggcatcctggtgcttctgatatgtctcagcagtctccacaggttggatcc
gatggtatgcttgatgattgggaggagaatctggctgtaataactgcaaacagaaccaaa
agtgatgaacttgtaattattcacctaggtgattgcttgtggaaggaaagaagtgagatt
actgccgcacacatctgctatttagttgctgaagcaaacttcgagtcatactcagatagt
gcaagactctgtttaattggagcagatcactggaaatgtcctcgaacttatgctagtcca
gaggctatccagaggaccgagttatatgaatattcaaaggtggttggaaactctcagttt
actttgcatccatttcagccatataagcttatatatgcatttatgctagctgaagtgggg
aaggttccagactcattgaagtactgccaagcactactgaaatccttgaaaactggccgt
gctccagaagtagaatcgtggaagcaattagcactatctcttgaggagaggattagaatt
caccaacagggtggatatgctgcaaatttagctcctgcaaaattagttggcaaattgctc
aacttttttgatagtactgcacatcgagttgttggtggtttaccaccacctgctcctttg
ccatcacaaggaactattcatggaagtgaacaacaataccaaaatatggcacccagagta
tcctctagccaatcaacaatgtcattggctccatctgcttcgatggaaccaataagtgag
tggacagctgacaataatagaatggcaaagcctaatagaagtgtttctgagccagatatt
ggtagaatcccaagacaggaaacaacatcacctgatgcacaaggaaaagcacaggcatca
gggggtacatctcgcttttcccgatttggttttggctcacaacttttgcaaaagaccgta
gggctagtcttgaaacctcgctctggtcgacaggctaaattgggtgagaaaaacaagttc
tattatgatgagaagctgaagagatgggtggaggaaggtgctgaagttccagctgaagaa
gcttctgctctgccaccgcctccaacaactgctgctttccagaatggttcaactgaatac
aactcgagatttgcattgaagactgaaagttcacctcctattgagggctctaacataaga
actgctagccctgaacttagtccagggatgccaccaataccacccagcgcaaatcaattc
ttggcccggggtcggttgggtgttaggtcaaggtatgttgacaccttcaaccaaggtggt
ggaacctctgcaaacttgtttcagtccccttctgttccttctgtgaaaccggctcttgct
gccaatgcgaagttttttgttcctactcctgcaccatcgtcaaatgagcaggcaatggat
gctatagcagaaggcaagcaagaagacagtgcaacaaatgaatatccttcaacatctgcc
acaaatgactggtcataccgatccccaaaacatgtatcatcaacagccatacaaaggttt
ccaagtatgggtaacatctcaaagcagggagcaacagaaggaagtaactctcatttacct
cattcacgccgaacagcttcatggagtgggagttttaatgattcatttacccctcaaaaa
atgggcaatatgaagcctttaggggaagctttgggcatgcccctgtcaagatattcacct
gatgaatcttcaatgcataaacctgtcaaaagtagcagttatggagaagatcttcacgag
gttgaactttga
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