Glycine soja (wild soybean): 114377648
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Entry
114377648 CDS
T06057
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
gsj03015
mRNA surveillance pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114377648
09122 Translation
03013 Nucleocytoplasmic transport
114377648
03015 mRNA surveillance pathway
114377648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114377648
03041 Spliceosome [BR:
gsj03041
]
114377648
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114377648
TREX complex
114377648
Spliceosome [BR:
gsj03041
]
Complex C
Other components
EJC/TREX
114377648
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114377648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Turandot
RRM_10
RRM_3
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
114377648
NCBI-ProteinID:
XP_028192064
LinkDB
All DBs
Position
11:complement(10821226..10826087)
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AA seq
247 aa
AA seq
DB search
MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATW
QHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV
HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPARNGA
IGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYH
AEAMQLN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctatggatatgtcgctcgacgacataatcaagaacaacaaaaaatctgga
tccggaagttcccgtggccggatccgaccctccggttccggaccttctcgccggttcccc
aaccgtgccgccaaccgcgccgctccttatgccaccgctaaggcgccggaggcgacgtgg
cagcacgatttatatgcagatcagcaagtggctgcggcggggtaccctgctcaaggtggt
cgtgcggcttccatagaaactgggactaagctttacatttcaaacttggattatggtgtt
tccagtgacgatattaaggaattgtttgctgaagttggtgacctgaaacggcatgcggtt
cattatgacaggagtggcagatcaaagggtacagcagaagtagtattttcacgacgagct
gatgctgtagctgctgtaaagagatacaacaatgttcagttggatgggaaaccaatgaag
attgagattgtgggaaccaacatttccacacctggtgtggctcctgctcgtaacggggct
attggaaattttgatggagttcctcgaagtggacaaggaagaggtggggcattaagaagg
ccaggaggaagagggcagggcgttcgaagggatcggggacggggaagaggtcgtggcgga
gcaggtcgcggtgaaaaggtatctgctgatgatcttgatgcggatttggagaagtatcat
gcagaggcaatgcaattgaactga
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integrated database retrieval system