KEGG   Glycine soja (wild soybean): 114377648
Entry
114377648         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
gsj03015  mRNA surveillance pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114377648
  09122 Translation
   03013 Nucleocytoplasmic transport
    114377648
   03015 mRNA surveillance pathway
    114377648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114377648
   03041 Spliceosome [BR:gsj03041]
    114377648
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114377648
    TREX complex
     114377648
Spliceosome [BR:gsj03041]
 Complex C
  Other components
   EJC/TREX
    114377648
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114377648
SSDB
Motif
Pfam: RRM_1 FoP_duplication Turandot RRM_10 RRM_3 YHR127W_C
Other DBs
NCBI-GeneID: 114377648
NCBI-ProteinID: XP_028192064
LinkDB
Position
11:complement(10821226..10826087)
AA seq 247 aa
MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGSGPSRRFPNRAANRAAPYATAKAPEATW
QHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSSDDIKELFAEVGDLKRHAV
HYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGVAPARNGA
IGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYH
AEAMQLN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtctgcagctatggatatgtcgctcgacgacataatcaagaacaacaaaaaatctgga
tccggaagttcccgtggccggatccgaccctccggttccggaccttctcgccggttcccc
aaccgtgccgccaaccgcgccgctccttatgccaccgctaaggcgccggaggcgacgtgg
cagcacgatttatatgcagatcagcaagtggctgcggcggggtaccctgctcaaggtggt
cgtgcggcttccatagaaactgggactaagctttacatttcaaacttggattatggtgtt
tccagtgacgatattaaggaattgtttgctgaagttggtgacctgaaacggcatgcggtt
cattatgacaggagtggcagatcaaagggtacagcagaagtagtattttcacgacgagct
gatgctgtagctgctgtaaagagatacaacaatgttcagttggatgggaaaccaatgaag
attgagattgtgggaaccaacatttccacacctggtgtggctcctgctcgtaacggggct
attggaaattttgatggagttcctcgaagtggacaaggaagaggtggggcattaagaagg
ccaggaggaagagggcagggcgttcgaagggatcggggacggggaagaggtcgtggcgga
gcaggtcgcggtgaaaaggtatctgctgatgatcttgatgcggatttggagaagtatcat
gcagaggcaatgcaattgaactga

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