Glycine soja (wild soybean): 114378229
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Entry
114378229 CDS
T06057
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114378229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114378229
03036 Chromosome and associated proteins [BR:
gsj03036
]
114378229
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114378229
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114378229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
114378229
NCBI-ProteinID:
XP_028192585
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Position
12:43879441..43887185
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AA seq
1007 aa
AA seq
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MFGSNPFGQSSSSPFGSQSVFGQTNSSSNPFAPKPFGSTAPFGSQTGGSIFGGTSTGVFG
TAQPASPFGASSSPAFGSSQPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGGFGSTPTQT
SPFGAAQPSQPAFGSSIFGSSTPFGASSQPAFGATSTPAFGATSTPAFGATSTPAFGATS
TPAFGATSTPAFGATSSPAFGATSTPAFGSTSSPTFGSAGSAFGVSSTPVFGSGGAFGAS
SNPMFGSSSTSAFGTSSSPFGASSTPAFGASSTPAFSFGSTPQAFGQSSSAFGNSSPFGS
TASPFGGQSSAFGSQTPTSTFGNTGGQSGFGGQQRGGSRVASYTATTEADSGTSGQTAKL
ESISAMPIYKDKSHEELRWEDYQLGDKGGPLPSALSTGLTGFGSSTTPTNAFSPSPVFGQ
SSANPFSSTTPNSNPFAPKSSPFSSGFGTSATPAFSSSAFGSSTSAAAPSLFGSTPSPFG
ANSSSTPSFGQSPSLFNTAPTQATSSPFGNSIFGNTLSSPLFSSAAPTGGQTASAFGQNT
SPFGQTTTPSFSQPSLFNSPSSGLVGSIFSSSAPLTSNNLTGFGQTAPSISTPFQSAQPA
QSSGAFGFGNFGQTQPVGASSFGGTPGMFGQNNFGLVSSTPLSSVAVQAVPNTNPFGTLP
ALPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSLLTSRHLSQRRIRLPVRKYHSKND
GPKVAFFSDDEDTPTTPKADALFIPRENPRALIICPVEQWPGKASEKASTFKDRSIPVNE
NESAVENGFVKEQAQPISTKPTSNGSNEDHSPQKADVYKTLRGHRAGEAAIVYEHGADVE
ALMPKLRRSDYYTLPRIHELAAKERAEPGFCSHVKDFVVGRQGYGSIRFLGETDIRGLDL
ESLIQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGHQYTEGPKIEKYKE
MLKRKTEDQGAEFVSYDPTKGEWKIRVSHFSIYKLVEDENSRINDGN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttcaaacccttttgggcagtcatcgtcgagccctttcggctctcaatcggtt
tttggacagaccaattcgagtagcaatccttttgctcctaagccgtttggtagtacagct
ccatttggttcgcaaaccggtggttccatatttggaggtacgtccactggggtgtttgga
acagctcaaccggcttctccgttcggtgcttcatcttcaccggctttcggtagttcacaa
cccgcttttgggtcatcttcaactcctgcttttggtagttcatcgtcatcgtttggtgga
tcgtcggtttttggtcagaagcctgcctttggaggctttggatctactcctactcaaaca
agtccatttggtgccgctcagccatcacaaccagcttttggaagcagcatatttggttcc
tcaacgccttttggtgcatcatctcagccagcatttggtgcgacgagcactccggcattt
ggtgctacgagcacccctgcatttggtgcaacgagcacccctgcatttggtgcaacaagc
acccctgcatttggtgcaactagcacccctgcttttggtgctacaagcagtcctgcattc
ggtgcaactagcacccctgcatttggttcaacctcaagtccaacttttggtagcgcaggg
agtgcatttggggtgtcaagtactcctgtatttggtagtgggggggcatttggggcttca
agtaaccctatgtttggttcatcaagtacatctgcgtttggcacttcaagcagtccattt
ggggcctctagtactcctgcttttggggcctctagtaccccagcatttagttttggatcc
actcctcaagcttttggtcaatcgtcttctgcatttggtaacagcagcccatttgggagt
acagcctcaccctttggaggtcaaagttcagcgtttggatcccaaactccgacatcaact
tttggaaatactggtgggcagtcaggttttggaggtcaacaacggggtggaagtagagta
gctagttacacagcaacaactgaagcagatagtggtacctctggacagactgcaaaattg
gagtccatatctgccatgcctatttacaaagacaaaagtcacgaggaactaagatgggag
gactatcaattgggagataaaggtggaccacttccctctgcgctgtcaaccggattgaca
ggctttggttcgtctacgacaccgacaaatgccttttctccttcaccagtgtttggtcaa
tcatcagccaatcctttctctagcacaacacctaattctaacccttttgcgccaaagagt
tcacctttttcttctggatttggaacttcggctactcctgcattcagttcatcagctttt
ggttcttcaacatcagcagcagcaccttctctttttggctcaaccccatctccatttgga
gccaactcttcttcaacacccagctttgggcaatctccatccctgtttaatactgctcct
actcaggctacatcttcaccatttggcaatagcatttttggcaacacactgtcatcccca
ttatttagttctgcagcccctacaggtggacagacagcttctgcttttggacagaataca
tccccctttggacagactactacaccttctttcagtcaaccaagtttgttcaattcacct
tcttctgggcttgttggaagtattttctcatcaagtgcaccactcacttctaataatctt
acaggttttggtcaaacagcgccgtccatttcaacaccttttcaatctgcacaacctgct
cagtcgagtggtgcttttggctttggcaactttggccagacacaacctgttggtgcaagc
agcttcggtggcactccaggaatgtttggtcagaataattttggacttgtgtcttctacc
cccctgagttctgtggctgtacaagcagttccgaatacaaatccatttggaacacttcct
gcattgcctcagatgtcaattggtcgagttggaactactccttcaattcaatatggaatc
tctagcatgcctgccctagacaaacctgctcctgttagaatatcgtctttattgacatct
cggcatctctcacaacgacgaataaggcttcctgtcaggaaatatcattctaagaatgat
ggtccaaaggttgcattctttagtgatgatgaggatactccaacaacacccaaggctgat
gctctgttcattcctagggaaaatccaagggcgttgataatttgtcccgtggagcagtgg
ccaggaaaggcttctgagaaggcatcaacatttaaggatagatccatcccagtgaatgag
aatgagagtgctgtagaaaatggttttgtcaaggagcaagctcagcctatatcgacaaag
ccaacatccaatgggagcaatgaagatcattctccacaaaaggcggacgtgtacaagaca
ctcagaggtcacagagctggtgaggctgccattgtatatgaacatggagctgacgttgag
gcactaatgccaaaactgcggcgatctgattactacacactgcctcggatacatgaactg
gcagccaaagaaagagctgaacctggattctgcagtcatgttaaggacttcgtggttgga
aggcaaggttatggcagcatcagattcttgggtgagacggacatacgagggctcgatctc
gagtccctcattcagtttaacaaccgggaggtgattgtatacatggatgattcaaagaaa
ccccctgtgggacaagggctgaataagcctgctgaggttacactactcaacataaaatgt
ttcgacaaaaaaactggacatcagtatacagaagggccaaagatcgagaaatacaaggag
atgctcaagagaaagactgaggaccaaggtgctgaatttgtatcatatgatcccactaaa
ggagagtggaagatcagggtcagccatttcagcatctacaagctggtagaagatgaaaac
agtcggataaatgatggcaactaa
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