Glycine soja (wild soybean): 114378365
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Entry
114378365 CDS
T06057
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114378365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114378365
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114378365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDB_G0287209_Ig-like
Motif
Other DBs
NCBI-GeneID:
114378365
NCBI-ProteinID:
XP_028192750
LinkDB
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Position
12:complement(5960502..5965676)
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AA seq
254 aa
AA seq
DB search
MAGKGGSTPATYSPSPTTDKKKPSLFNEDLARPDGRSFHQCRPAFFRTGAVNAASGSAYA
EVGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPIRGQGSDHKEYSSMLHKAL
EGAIILETFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSCFNK
NLVIDPVLEEENGQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKI
MRSCLKEAVSDSQE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaaaggtggatcaactccggccacatattcgccgtctccgacgaccgataag
aagaaaccatcgcttttcaatgaggatttggctcgacctgatggccgcagtttccaccag
tgcagacccgcatttttcaggactggtgctgtgaatgctgcatctggatctgcttatgct
gaggttggaaataccaaggtcattgtatcagtatttgggccaagagagagcaagaaggcg
atgatgtacagtgatatagggcgtttgaattgcaatgtcagctttacaacgtttgcaact
ccgattcgtgggcagggttcagaccacaaagagtacagttcaatgcttcataaagctttg
gagggagcaataatactggaaacattccccaagacaactgtggacgtctttgcattggtg
ctggaatctagtggcagtgatctcccagttgtcatatcatgtgcaagccttgctcttgca
gatgcgggaataatgatgtatgatcttgttgcctcagtttctgtgtcatgttttaataag
aaccttgtcattgatcctgttttggaggaggaaaatggccaagatggaagcttaatgatt
acttgcatgccttctcgctatgaaatcacccaactcaccgttactggggaatggtccacc
ccaaagattaacgagggaatgcagctgtgtttggatgcttgtgcaaagcttgcgaagatt
atgaggtcatgtttaaaagaagctgtttcggattcccaggaatag
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