Glycine soja (wild soybean): 114378459
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Entry
114378459 CDS
T06057
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
114378459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsj04040
]
114378459
Ion channels [BR:
gsj04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114378459
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
114378459
NCBI-ProteinID:
XP_028192854
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All DBs
Position
12:25497482..25511107
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AA seq
732 aa
AA seq
DB search
MFDCGYKSQYVGGQCEKFVRLDDLDSRLSSSSEAAVKTCGFSIDKLSHGGHGSSTTSRSF
KRRIRKGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLTWNKLFVISCILA
VSVDPLFFYLPVINDSFHCLGIDRKLAITVTTLRTFIDAFYLVHMALQFRTAYIAPSSRV
FGRGELVIDPAQIAKRYLRRYFIVDFLSVLPLPQIVVWRFLQRSKGSVVLATKRALLFII
LHQYIPRFFRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYLLAVERND
FCWQKACSGNGYNKNFLYCGNQYMEGYSAWQNRSKDILTSQCSVDNDNSPFDYGIFKQAL
SSRIVSSKKFFSKYCYCLWWGLQNLSTLGQGLETSTYTGEVVFSIALAIAGLILFALLIG
NMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEESLV
QSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVD
EMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKA
LTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKT
MELSQKDEPEESEGTRGNASGSSYSLGATFLASRFAANALRGVHRNREAKSARELVKLQK
PPEPDFTADDAD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtggttacaagtcgcaatatgtgggtgggcaatgtgaaaaatttgtgagg
ttggatgacttggattctagactatcatcatcttctgaagctgcagttaaaacatgtgga
tttagtattgataaattaagccatggtggccatggaagcagtactacttctcggtctttt
aaaagaagaattagaaagggatccgaaggactgaagtcaattggccgatcacttggatta
ggggtatctagggcagtgttccctgaagatcttaaagtttcagaaaagaagatatttgac
cctcaagacaagtttttgctcacctggaataagctttttgttatatcatgcattttagct
gtgtctgttgatccattgtttttttatctccctgtcatcaatgattcatttcactgtctt
ggtatcgaccgaaagttggcaattacagttaccaccttgaggacattcattgatgctttc
tatctcgtacacatggccctccaatttcgtactgcttatattgctccatcatctcgtgtt
tttggacggggtgagcttgtgatagatccagcacagatagccaaacgatacctgcggcgg
tatttcattgttgattttctatcagtgttgcctttaccacagattgtggtttggagattt
ctgcagaggtcaaaaggttcagttgtacttgcaacaaagagggcccttctgttcatcatt
ttgcatcagtacattcctagatttttccggatggtaccgttgacttctgaacttaagaga
acagctggtgtctttgctgaaactgcatgggcaggggctgcatattatttgctattattt
atgcttgctagtcatatagttgggtcgttttggtacttgttagctgttgaacgcaatgac
ttttgctggcaaaaggcttgtagtggcaatgggtacaataaaaatttcttgtattgtggc
aaccaatacatggaaggttatagtgcctggcagaatagaagtaaagatattcttacatca
cagtgctctgtagataatgataattcaccttttgactatggaattttcaaacaagccttg
tcatctcgtattgtttcatctaagaagttcttctccaagtactgttactgtttatggtgg
gggctccaaaatttaagtacacttggccaggggcttgaaacaagcacctacactggggag
gttgtcttttcaatagcactagccatagctggccttatcctatttgcacttctgattggt
aacatgcagacatatcttcagtctcttacaattagacttgaggaaatgagagtcaaaaga
cgtgattcagaacagtggatgcatcatcgcttgctcccacaagagcttagagagcgtgtg
agacgatatgatcaatacaagtggttggcaacacgtggtgtagatgaagaaagtttggtt
cagagtttgccaaaggatcttcgaagagacattaagcgtcacctttgtctggctctagtg
agaagggttccactatttgagagtatggatgagagattgcttgatgccatatgtgagaga
ctgaagccatgcttatttacagagagtacttacattgttcgtgaaggagatccagttgat
gagatgctcttcatcatacggggtcgccttgagagtgttactacagatggtgggaggagt
ggattcttcaatcgtggttttttaaaagaggccgacttctgtggggaggagcttttgacc
tgggcactggatcccaaatctggctctaatctcccatcttctactcgaacagttaaagct
ttaacagaagttgaagcttttgccttaactgctgaagagttaaagtttgttgccagtcag
tttaggcgcctgcacagtagacaggttcagcacacctttcgcttttactcccaacagtgg
aggacttgggctgcatgctttattcaagcagcctggcgtcgctattccaaaaggaaaact
atggagcttagtcagaaggacgaacctgaggagtcagaaggaactcgtggcaatgccagt
ggcagttcgtacagccttggtgccaccttcttggcctccagatttgctgcaaatgctctt
cgtggtgtacatcggaatcgggaagccaagagtgccagggagttggtgaaactacagaaa
cctccagagcctgacttcactgctgatgatgcagactaa
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