Glycine soja (wild soybean): 114379199
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Entry
114379199 CDS
T06057
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114379199
03036 Chromosome and associated proteins [BR:
gsj03036
]
114379199
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114379199
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114379199
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
114379199
microRNA pathway
RISC loading complex
114379199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
HTH_ABP1_N
Motif
Other DBs
NCBI-GeneID:
114379199
NCBI-ProteinID:
XP_028193602
LinkDB
All DBs
Position
12:6675021..6680990
Genome browser
AA seq
961 aa
AA seq
DB search
MSPRGGSKQQPDSRRQAPPSAAAAVPSPPGRGRGRGRGESSVPAPSLVNAPSAPPPASTI
GVPSGAAPFRAALPPPAVESLTSAVEKQLTMQPSAPSSSKAVRFKERPGFGLAGEKIKVR
ANHFQVQVAEQDLFHYDVSINPEITSKKVSRDVMTLLVQAHREKILGNRIPAYDGGKSLF
TAGSLPFESKDFVIVLKDDDEPGSSSSSSPTRKKREREYRVTIRLASRTDIHHLSQFLRR
RQLDCPYETIQALDVVLRATPSERFVVVGRSFFSPSLGKPGSLGSGTEYWRGYYQSLRPT
QMGLSLNINVSARAFYEPIPVIDFIESHFRANPSRPLPDQDRIKLKRVLRGVKVEVTHGK
NLRRYKITGVTKEQLRKLMFTLDDNRTKSSVVQYFHEKYNIVLKHTLLPALQAGSDIKPI
FLPMELCQIVAGQRYTKRLNEEQVTNLLRASCQRPRDRENSIRQVVRQSNFSTDKFVSHF
GIQVREDPALLDARVLPAPMLKYHDTGRESSVEPKMGQWNMIDKKMFNAGVVEHWTCLNF
SGKINREFPSAFCHKLARMCSNKGMRFNSKPLLPITSAQSSQIESALVNLHKQSITRLAN
QGRLQLLIIILPDFEGSYEKIKRICETELGIVSQCCQPRHVCQMKPQYLENVALKINVKV
GGSNTVLNDAIARIIPRVSDRPTLILGADVTHPQPGEDSSPSIAAVVASMDWPYVTRYRG
VVSAQTHREEIIQDLYNTCEDPVKGKVHSGIIRELLRAFRLSTNQKPERIIFYRDGVSEG
QFSQVLLYEMDAIRRACASLQEGYLPRVTFVVVQKRHHTRLFPVDHGSHDQTNKSGNIMP
GTVVDTHICHPREFDFYLNSHAGMQGTSRPTHYHVLFDENNFTADGLQMFTNNLCYTYAR
CTRSVSIVPPVYYAHLAAFRARCYIEVATSDSGSASGGRAANCEVRLPSVKENVKDVMFF
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcgcggtggctccaagcagcaaccagattcacgccgtcaagcgccaccgtcc
gcggcggcggcggtgccttctcctcccggaagaggacgcggccgtggacgcggagaatcc
tccgttcccgcgccttctctggtgaatgcaccatctgctcctcctccggcttccaccatc
ggcgttccgtccggcgccgcgccttttcgtgctgcgttgccacctccggcggtggaatct
ctcacttccgcggtcgaaaagcaacttacaatgcaaccttcggcgccgtcgtcgtcgaag
gcggtgaggttcaaggaacggccagggttcggtcttgctggggagaaaatcaaagttcga
gcgaatcattttcaagtccaagtcgccgaacaagatctatttcattatgacgtctctatc
aatccggagattacttcgaagaaggtttctagagatgttatgactttgcttgtgcaagcg
catcgtgaaaagattctcggaaatcgcataccagcctacgatgggggaaagagtcttttc
accgctggatccttgcccttcgaatctaaggattttgtgatcgtgctaaaagacgacgat
gaaccaggctcgtcgtcttcttcctctcctactaggaaaaaacgtgaacgcgagtataga
gtcaccatcaggcttgcttccagaactgacattcaccacctcagtcagtttctcaggcgc
cgtcagttggattgtccttatgagactatccaggctcttgatgttgttctgcgtgctaca
ccgtctgaaaggttcgttgttgtgggaagatcgttcttctcaccttctttggggaaacct
ggatcgcttggtagcggaacggagtactggaggggctattaccagagccttcgcccaact
cagatgggcctgtctcttaacattaatgtgtcggcgagggctttttatgagcctattcct
gtgattgatttcattgaaagtcattttagggccaatccttccaggcctttgcctgatcag
gatcgaatcaagcttaagagagtactgagaggagtgaaggtagaagtgactcatggaaag
aatcttagacgttacaagatcactggagtcacaaaagaacaactcagaaagttaatgttt
actcttgatgacaatagaacaaaaagctcagttgttcaatattttcatgagaaatacaat
attgtgttgaagcatacgcttcttcctgctcttcaagctggtagtgacattaaaccaatt
tttctgcctatggagctttgtcaaattgtggctggacaaagatatacaaagagattgaat
gaggagcaagtaactaatcttttaagggcatcttgtcagcgtcctcgtgatagagaaaac
tctatcagacaggtggtgaggcaaagtaatttcagcacagacaaatttgtgagtcacttt
ggaattcaagtgagggaggatccagcattgcttgatgctcgagttcttcctgcaccaatg
ctaaaatatcatgacacaggtagagaatcaagtgttgaacccaaaatgggccaatggaat
atgattgataagaaaatgtttaatgctggtgttgtggaacattggacttgcctcaacttt
tctggaaaaataaacagagagtttccaagtgcattttgtcataagttggccagaatgtgt
agtaacaagggcatgcgttttaattcaaagcctttactgcccataacatctgctcaaagt
agtcaaatagagagtgctcttgtaaatttgcataagcagtctattacaagactagcaaac
caaggaagactccaattgttgatcataattttgccagatttcgaggggtcctatgaaaaa
ataaagcgtatttgtgaaactgagctaggaatagtgtctcagtgttgtcagccgaggcat
gtttgccagatgaagccacaatatcttgaaaatgtggccctcaagataaatgtgaaggtt
ggtggcagtaacacagtattgaatgatgcaattgctagaataattcctcgtgtgtctgac
agacctacattaatcttgggtgcggatgtaacacatccacagccaggggaagattctagt
ccttctattgctgcagtagttgcatctatggattggccttatgtaacaaggtacagagga
gttgtttctgctcagactcaccgtgaagaaatcatccaagatctttataatacatgtgaa
gatcctgtgaaggggaaggtgcattcgggaattatcagggagttacttcgcgctttccgt
ttgtctactaatcagaagccagagaggattatattctacagggatggagtaagtgagggc
caattcagccaggttttgctgtacgagatggatgcaatacggcgggcttgtgcttcacta
caagaaggctatttaccccgtgttacttttgtggtggtccaaaaacgacaccacacaagg
ttatttcctgtagatcatggaagtcatgatcagacaaataaaagtggaaatataatgcca
gggactgtcgtagacacacacatatgccaccctcgggagtttgatttttacctcaacagt
catgctggaatgcaaggaactagtcgaccaacacattatcatgtgctgttcgatgaaaac
aacttcactgctgacgggttgcaaatgtttactaataatttgtgttatacgtatgcaagg
tgtactcgatcagtctcaatagttccacctgtgtattatgcacatttggctgccttcagg
gctcgctgttacattgaagttgcaacatcagattctggttctgcaagtggaggccgggct
gctaactgtgaggttagattgccttcggttaaggaaaatgtgaaagatgtgatgtttttc
tgttaa
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