Glycine soja (wild soybean): 114379590
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Entry
114379590 CDS
T06057
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114379590
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114379590
REST complex
114379590
Heterochromatin formation proteins
Other heterochromatin formation proteins
114379590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
114379590
NCBI-ProteinID:
XP_028194078
LinkDB
All DBs
Position
2:2374272..2386646
Genome browser
AA seq
1430 aa
AA seq
DB search
MKRSRDEVFTSCSQLKRPVVSSRGEASGQPQIMNGGAQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFNTFLPKGYEITLPSEDEQL
APKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAIFQDH
PDLLDEFTHFLPDASAAASTHFVSARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDP
SVDRPDPDNDRGLLRIEKERRRVEKEKERREDRDKRDRERDDRDFEHDGARDRERFSHKR
NRKVEDSGAEPFLDADENFGAPPMPSTCDDKNSLKSMYSQEFAFCENVKEKLRNPDDYQE
FLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDGGFLAGVMNKKSL
WNDGHGLKQIKVDDGDRDRDRDRDRDRYRDDGMKERDREFRERDKSTVIANKDVLGSKMS
LYPSKEKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQKTELGAGVLNDHWVSVTS
GSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINSNIIKGDSL
IRIEEHLTAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQEEWARCRADFS
KVWGEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGN
RRPILPNLEFKYSDPDIHEDLYQLIKYSSGEICTTEHVDKVMKVWTTFLEPMLCVPCRPQ
GAEDTEDVVKAKNNHVKNGTATVAESDCSPVVGAIIMNPKHINVSRNGDDCMPLDQSTSN
KAWQSNGGVREDRYLDDCALRKTETLGSNTQHGKMNRIAFTPDGPSGFNNKQDQSSERLV
NANVSPASGMEQSNGRTNIDNLSGLTATPTRPGNASVEGGLDIPSSEGGDSTRLGTSTNG
AITGGTKVHRYQEESVRAFKSEREEGELSPNGDFEEDNSEVYGGNGLDAVHKGKDGGVSR
QYQNRHGEEVCGETRGENDADADDEGEESPHRSSEDSENASENVDVSGSESADAEECSRE
EHEDGEHDNKAESEGEAEGIADAHDVEGDGMPLPYSERFLLTVKPLAKHVPPMLHEKDMN
SRVFYGNDSIYVLLRLHQTLYERIQSAKINSSSADRKWKASSDTSSTDQYDRFMNALYSL
LDGSSDNTKFEDDCRAIIGIQSYVLFTLDKLIYKLVKQLQAVAADEMDTKLLQLYAYEKS
RKPGKFVDMVYHENARVLLHDENIYRIEYSPGPMKLSIQLMDSGHDKPEVTAVSMDPNFS
TYLHNDFLSVVPDKKEKSGIFLKRNKRRYAGNDEFSSQAMEGLQIINGLECKIACSSSKV
SYVLDTEDFLFRIRRKKRVLHPKSSGAHEQAQSPKSSSRVQRFRNLFSIT
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagatgaagttttcacgagttgttctcaactcaaacggcccgtggtg
tcttcacgaggagaagcgtctgggcaaccgcagataatgaacggaggtgctcagaaactg
acaactaatgatgccctagcatatctcaaggcagtaaaggatatatttcaagataagagg
gacaagtatgatgactttttggaggttatgaaagatttcaaggctcaaagaattgatact
gcgggtgtcattgcaagagtgaaggaactgtttaaaggccatagagatcttatattggga
tttaacaccttcttgcctaagggttacgaaatcacacttccatcagaggatgaacaactt
gccccaaagaaacctgttgaatttgaagaggctataaattttgtgaacaagataaagact
cgttttcaaggtgatgatcatgtgtacaaatcatttcttgacatattgaatatgtacaga
aaggaaaacaaatctattactgaggtctaccaggaggttgctgctattttccaggaccac
cctgatcttcttgatgagtttactcattttcttccagatgcttctgcagctgcctctact
cattttgtttctgctcggaattctatgcttcgtgataggagctctgcaatgccaacaata
cgacaattgcacgttgaaaagcgagaaaggaccattgtttcacatggtgatcatgacccc
agtgttgatcgtcctgacccagataacgacagaggtctgttaaggatagaaaaggagagg
agacgtgtggagaaggaaaaggaacgtagagaagatagagacaagagagatcgtgaaagg
gatgatagagattttgagcatgatggggctcgagatagggagcgattctctcacaaacgg
aatcgtaaggttgaagactctggagctgaaccatttcttgatgcagatgaaaattttggt
gcgcctcctatgccatccacttgtgatgataaaaattctctgaaaagtatgtacagtcaa
gaatttgctttctgcgaaaatgtcaaagaaaaattacgaaatcctgatgactaccaggaa
tttttgaagtgcttacatatctacagcagggaaataattacccgacatgagttgcagtca
ttggtgggcgatttactgggaaaatatccagatcttatggaggggtttaatgaatttttg
cttcaatctgaaaagaatgatggtggattccttgctggtgttatgaataaaaagtcctta
tggaatgatggacatggactgaaacaaataaaggttgacgacggggatagagatcgggat
cgagatagagatagagaccgttatagggatgatgggatgaaagaaagggaccgtgaattc
cgagaaagggacaaatctactgtgattgccaacaaggatgttttaggttctaagatgtct
ctatatcccagcaaggaaaagtatttatccaaacctataaatgagctggacctttctaac
tgcgaccagtgcactcctagttaccgcctcttaccgaaaaattacccaatacctgtagct
agccagaaaacagaacttggtgccggagtgttgaatgatcactgggtgtctgtcacttca
ggaagtgaggattattccttcaaacatatgcgcaaaaatcagtatgaagagagcttgttt
agatgtgaagatgacaggtttgaacttgacatgttgttagagtctgtaaatgtgacaacc
aaacgagtagaagagctgttagacaagatcaatagtaatataattaaaggagacagccta
attcgtattgaggagcacttaacagctataaatcttaggtgtattgaacggttatacggt
gaccatgggcttgatgtgatggaagtgttaaggaagaatgcacctctagctttgccagtg
atattaacacgcttgaagcagaaacaagaagagtgggcaaggtgccgtgctgattttagt
aaagtttggggtgaaatatatgctaagaactatcacaaatctcttgatcaccgtagcttc
tactttaagcaacaggatacaaaaagcttgagcaccaaagccttgctggcagaaatcaaa
gaaatcagtgaaaagaaacgcaaggaagatgatgttcttcttgctattgctgctggaaat
agacggccaattcttccaaacttggagtttaagtattctgatccagatattcatgaagat
ttatatcagctcataaaatattccagtggagaaatttgcacaaccgaacacgtggataaa
gttatgaaggtttggacaacatttttagaacccatgctttgtgttccttgtcggccccag
ggtgcagaggatacagaagatgttgtcaaggctaagaataatcatgtcaaaaatggcact
gcaactgttgctgaaagtgactgtagccctgttgtgggtgctatcataatgaatccaaag
catataaatgtttccagaaatggggatgattgtatgccattagatcaatcaacttctaat
aaagcatggcagtcaaatggtggggttagagaggataggtatcttgatgactgtgcattg
cgtaaaactgaaactttgggcagcaatacacagcatggtaaaatgaatcgtattgcattc
acacctgatggaccatcaggatttaacaataagcaagaccagtccagtgaacggttagtg
aatgctaatgtctcaccagcatctggaatggagcaaagcaatggaaggacaaacatagat
aatttgtcaggactcactgccactccaactagacctggtaatgcttctgttgagggagga
cttgatataccgtcatcagagggtggtgattctacaagactgggtacatccacaaatggg
gccatcaccggaggcaccaaagttcaccggtaccaagaggaatcagttcgagccttcaaa
agtgaaagagaagagggtgagttatctcctaatggagactttgaagaagataactctgaa
gtttatggaggtaatggtttggatgcagtgcataaaggaaaggatggtggtgtgagtcgg
caataccaaaatagacacggggaagaagtttgtggtgaaactagaggagaaaacgatgct
gatgctgatgatgaaggtgaagaaagccctcacaggtcatcagaggacagcgaaaatgca
tctgaaaatgttgatgtttctggaagtgagtcagctgatgctgaggagtgttctcgagaa
gagcatgaggatggggaacatgataacaaggctgagagtgaaggtgaagccgaaggaata
gctgatgctcatgatgttgaaggtgatggaatgccattgccatattctgaacgctttcta
ctaactgtgaagcctctagcaaagcatgttcctccaatgttacatgagaaggacatgaat
tcacgagttttctatggaaacgattccatttatgtgctgcttagacttcatcagacattg
tatgagaggatacaatcagcaaagattaactcatcatccgccgataggaaatggaaggct
tcaagtgatacaagctccaccgatcaatatgacaggttcatgaatgccctttacagtttg
ctggatggttcttctgataatacaaaatttgaggatgattgtcgagctataattggaatt
caatcatatgtcttattcacattagacaagttgatatataaacttgttaaacagcttcaa
gctgttgccgctgatgagatggataccaagcttttacaactatatgcatatgagaaatcg
agaaaacccggaaaatttgttgacatggtttatcatgaaaatgcccgtgttcttctccat
gatgagaacatatatcgtattgaatattcacctggaccaatgaaactgtctattcaactg
atggactctggacatgataaacctgaagtgactgctgtgtcaatggaccctaatttttca
acctatctacacaatgacttcctatctgtcgtccctgacaaaaaagagaagtcaggaatt
ttcttgaagaggaataaacgtagatatgctggtaatgatgaattttcaagccaggctatg
gaaggactacaaattattaatggtctggagtgtaagatagcttgcagttcatctaaggtc
tcatatgttttagataccgaagactttttgtttcggataagaaggaaaaaaagagttttg
catccaaagagttcaggcgcccatgaacaggcacagtctccaaagagttcaagcagagta
caacgattccgcaatttgttttccattacatga
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