Glycine soja (wild soybean): 114379745
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Entry
114379745 CDS
T06057
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03082
ATP-dependent chromatin remodeling
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114379745
03083 Polycomb repressive complex
114379745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsj03036
]
114379745
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114379745
Histone modification proteins
HAT complexes
HATB complex
114379745
HDAC complexes
Sin3A-HDAC complex
114379745
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114379745
PRC2.2
114379745
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114379745
Heterochromatin formation proteins
Other heterochromatin formation proteins
114379745
Chromatin remodeling factors
NuRD complex
114379745
NuRF complex
114379745
NuRF complex (fruit fly)
114379745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
MIOS_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
114379745
NCBI-ProteinID:
XP_028194235
LinkDB
All DBs
Position
12:complement(2520664..2523497)
Genome browser
AA seq
401 aa
AA seq
DB search
MAEEYEEGGEVEEEFSVWKKNTPLLYDFFISHPLQWPSLTVHWLPSSPQPHSHPSFNLHK
LLLATHTSEGESNFLMLADASLPVDTSQHIVATDPNNPVLPKVEISQRISVDGEVNRARC
MPQNPSIVGAKTCNSEVYVFDFTKERGSACDPDLRLRGHDKEGYGLSWSPFKNGYLLSGS
HDHKVCLWDVPGASQEKVLDALHIYEGHENVVEDVSWNLKDENMFGSSGDDCKLIIWDLR
TNKAQQSVKPHEKEVNFLSFNPYNEWILATASSDTDVGLFDTRKLAVPLHILSSHTDEVF
QVEWDPNHETVLASSGADRRLMVWDLNRVGGEQIEGDGEGGPPELLFSHGGHKGKISDFS
WNRNQPWVISSVAEDNSFHVWQMAESIYNDGDDDNMWTADD
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagtacgaggaaggtggtgaggttgaagaagagttctccgtttggaagaag
aacactcctctattgtacgatttcttcatttctcaccctcttcaatggccttctctcacc
gttcactggcttccctcctctccccaacctcactcccacccttccttcaatctccacaaa
cttcttctcgccactcacacttccgaaggcgaatcaaacttcctcatgctcgctgacgca
tccctccccgtagacacctcacaacacatcgtcgccaccgatccgaacaaccccgttctt
cccaaggtggagatttctcaaaggatttctgttgatggggaggtgaatcgagcgcggtgc
atgccgcagaaccctagtattgttggtgccaagacttgtaattccgaggtttatgtgttt
gatttcaccaaggaacgtgggagtgcgtgtgaccctgatttgaggttaaggggtcatgat
aaagagggttatggtttgtcttggagcccttttaagaacgggtatcttttgagtggttcg
catgaccataaggtttgcttgtgggatgtgcctggtgcctctcaagagaaggtgcttgat
gcacttcatatttatgagggtcatgagaatgtggttgaagatgtgtcatggaatttgaag
gatgagaatatgtttgggtccagtggagatgactgcaaattgatcatttgggacttgcgg
acaaacaaagcccaacaatcagtcaaaccacatgaaaaggaggtgaactttctttctttc
aatccatataatgaatggattttggctacagcatcttcagatacagatgttggcctcttt
gatacacggaagctggcagtgccgctacatattttaagtagccacacagatgaagttttc
caggtagagtgggatcctaatcatgagactgtgttggcatcttctggtgctgacagacgg
ctgatggtttgggaccttaacagagttggtggtgagcagatagagggagatggtgaaggt
ggccctcctgaactactattctctcacgggggtcacaaagggaaaatatcagatttttca
tggaacagaaatcagccatgggttatctcaagtgtagctgaggacaattctttccatgtc
tggcaaatggctgagagcatttacaatgacggagatgatgacaacatgtggacggccgat
gattaa
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