Glycine soja (wild soybean): 114379806
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Entry
114379806 CDS
T06057
Name
(RefSeq) DNA polymerase delta subunit 3
KO
K03504
DNA polymerase delta subunit 3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03030
DNA replication
gsj03410
Base excision repair
gsj03420
Nucleotide excision repair
gsj03430
Mismatch repair
gsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114379806
03410 Base excision repair
114379806
03420 Nucleotide excision repair
114379806
03430 Mismatch repair
114379806
03440 Homologous recombination
114379806
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsj01009
]
114379806
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsj03032
]
114379806
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114379806
Protein phosphatases and associated proteins [BR:
gsj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114379806
DNA replication proteins [BR:
gsj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
114379806
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
114379806
MMR (mismatch excision repair)
DNA polymerase delta complex
114379806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
MsyB
Motif
Other DBs
NCBI-GeneID:
114379806
NCBI-ProteinID:
XP_028194341
LinkDB
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Position
12:complement(43530545..43537074)
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AA seq
518 aa
AA seq
DB search
MAQTQTLSFIHEIESLVSDKLQVVSYKWLSRNYMVSSDEAKRLLQEFVQKHEGGLEVVYA
LSGWLKSNHPSYHVRLVTGPKLAEAQQEFDGDCSVQIYSVQASIPKDPAVLWNAEFIQAE
ELFKQPSSVDNCLRDNRFCGISNSFVQRNVDGPTVVFAAPQSKSVGEGPTKSDIVQQPPK
NISRDSIDKVDTKPQSVVKEVKSESNGIGNTGVHDNMNKPTADKEKAPPLPTGKKKVQAD
KSGSVNGGSLASLWGRASAKPKPCSSSAENNNKISNPLVSTEAGQTAACEAEECDSGNDD
NQDVSLRRSSNRKRRVVFDFSDEDEDDVVSLASPDLPNKQSSLDSRQNDKKTSEKTTLNF
DLQEENKSGVKEERATEQKAHLPLRENVSAISRCTNTGKSSSEKLQSGAPEVHLNKDSVN
NAPPCSPKRRKVMKTRIDERGREVTEVVWDGEETEEKKPDKVTTKKSDSNASTKAINSAP
ATKKPPANSNAISGKGGKKAGNSKDPKQGNILSFFKRV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacccaaaccctatccttcattcacgagatcgaatctctcgtctccgataaa
cttcaagtggtttcgtacaaatggctgagtcgcaattatatggtatcgtccgatgaagca
aagaggttgcttcaggagtttgtgcaaaaacatgagggtgggttggaggtggtgtatgct
ttgtctggctggttaaagagcaaccatcctagttaccacgtaaggcttgttaccgggcca
aagcttgcagaagcacaacaagaatttgatggtgattgctccgttcagatatatagtgtg
caagctagcattcccaaggatccagctgttctttggaatgctgagttcattcaagcagag
gagctcttcaagcaaccttcctcggttgacaattgtttgagggataataggttctgtggg
atctctaattcttttgtgcagcggaatgtggatggcccaacagtagtttttgcagctcct
caatcaaaatctgtaggtgagggaccaacaaagagtgacatagttcagcaacctcctaaa
aatatatcacgtgattcgattgacaaagtcgataccaaaccacagagtgtggtaaaagaa
gtcaagagtgaaagcaatggtatagggaatactggagttcatgataacatgaacaaacct
actgcagataaagaaaaggcccctcccttacccacaggcaaaaagaaagtacaagctgat
aaaagtggttctgttaatggaggttcattagcaagcctttggggccgtgcatctgcaaaa
cccaagccttgctcctcatcagcagaaaataataacaaaatttcaaatcctcttgtatct
actgaagctggacaaactgctgcttgtgaagcagaagagtgtgacagtggtaatgatgat
aatcaagatgtctccttgaggaggtcgtccaataggaaaagaagggttgtctttgatttc
tcagatgaagatgaagatgatgttgtcagtttagcatcacctgatctcccaaataaacaa
tcatctctagattctagacaaaatgacaaaaaaacatcagagaaaaccactctgaatttt
gatttgcaggaagaaaataaatcaggggttaaggaagaaagagcaactgagcaaaaagct
caccttccactgagagaaaatgtatcagctatcagcaggtgcacaaatactgggaaatca
tcttctgagaagttgcagagtggtgctcctgaagtacatttaaataaggatagtgtaaac
aatgcccctccatgttcacctaagaggagaaaagtgatgaagaccaggattgatgaacga
gggagagaagtaactgaagtagtctgggatggggaggagacagaagagaagaaacctgat
aaggttacaacaaagaagtctgacagtaacgcatctaccaaagctatcaatagtgctcca
gcaactaagaagccaccagccaattcaaatgccattagtggaaaaggaggaaagaaagca
ggaaactcaaaggatcccaaacagggcaatattctttcatttttcaagagagtttga
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