Glycine soja (wild soybean): 114379924
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Entry
114379924 CDS
T06057
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114379924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114379924
Spliceosome [BR:
gsj03041
]
Complex A
Other components
Complex A specific factors
114379924
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
KH_12
KH_PNO1_2nd
RRM_7
PHD_4
Motif
Other DBs
NCBI-GeneID:
114379924
NCBI-ProteinID:
XP_028194549
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Position
12:438787..443584
Genome browser
AA seq
780 aa
AA seq
DB search
MDAVDSTPNPPPLPTYDPSEYHNPPQHQSETGQNGNGTNLGKPSENGSQVAADNNGLNPQ
ISKPLLSEGLTRSGTDRDQSGGEEETTSKRRRRSRWDPQPESNEQSGGDSGTGPKKRKSR
WADDDPKPVIQLPDFMGGIEFDPEIQALNSRLLEISRMLQSGLPLDDRPEGARSPSPEPI
YDNMGIRINTREYRARERLQKERQEIISQIIKKNPAFKPPVDYRPPKLQKKLYIPMKEYP
GYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLV
EAETPESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQ
YACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGSVPESATK
QTSTLAIGAGTSGSNPPWANNSGTAGSAPQAGLGAAAIKKEIDDTNLYIGYLPPTLDDDG
LIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAILAMNGYRLEGRTIAVRV
AGKPPQPVVPPGPPASAVPTYPVPSQPLGAYPSQQYAAGGPIGTAPPGSYGGTPVPWGPP
VPPPYAPYAPPPPGSTMYPPMQGQPMPPYGVQYPPPVPTGPPGAPSQPATSSEVQQSYPP
GVQSDNSTSTQSIPANVYGNSGPPMPPQPTYPASYGYPPYYNAVPPPPPPSAPMPVSTSD
QSHNIANVPWASNSLVPPPASSADNQSQSIGNVPRAANPSVPPPASSADSEYEKFMAEMK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgactcaaccccaaatccccctcccctccctacctacgatccatcagag
tatcacaacccgccgcaacatcaatcggaaaccgggcaaaacggtaacggcaccaacctc
ggaaaaccatcggagaacggcagtcaggtcgctgccgacaacaacggcttgaatcctcag
atttcgaagccattgctatccgaaggattgacgcggagcggcaccgacagggatcaatcc
ggcggcgaggaggagaccaccagcaagcgccgccgccgcagtcggtgggacccgcagccg
gaatcgaatgaacagagcggcggcgattcggggaccggaccgaagaagaggaagtctcgt
tgggccgatgacgaccctaaaccggtgattcagcttcctgatttcatgggcggtattgaa
ttcgatcccgagattcaagctttgaatagtaggcttcttgagattagtcgaatgttacag
tcaggtttacccttagatgatcgccctgaaggtgctcgttccccttcgcctgaacctata
tatgataacatgggcattagaattaacactagggaatatcgtgcgcgtgagagattgcaa
aaggagaggcaggaaattatatctcagattataaagaagaatcctgcgtttaagccacct
gtggattataggccgcccaagcttcagaagaagctttatataccgatgaaggaataccct
ggttacaatttcattggacttattattggtcctcgaggtaacacccagaagcggatggag
aaagaaaccggtgctaaaattgtgattcgtggtaagggatcggtgaaagagggtaggctt
cagcagaagagggatttgaaacctgacccttcggagaatgaggatttgcatgtgttagta
gaggctgagacgccggagtcacttgaggctgctgcgggtatggtggagaagctcttgcag
cctgtggatgaggtattgaatgagcacaagaggcaacagcttagggagcttgctgcgttg
aatgggacgatcagggacgaggagtattgcaggttgtgtggtgagcctggtcatcgccaa
tatgcatgtcctactaggacttcaacgtttaagagtgaagttgtgtgtaagcattgtggg
gatggtggtcatccaagcatagattgtccggtgaagggtgcgactgggaagaagatggat
gatgagtatcagaatttccttgcagagttgggaggttcggttcctgaatctgcaacaaag
caaaccagtacattggcaattggtgcaggcacttctggaagcaatcctccttgggctaac
aattctggtactgcaggcagtgcacctcaagctggcttaggggctgctgcaattaagaag
gaaattgatgatacgaatttgtacatagggtacttgccgcccactcttgatgacgatggc
ctgatccaattatttcaacaatttggtgagattgttatggcaaaagttatcaaggatcga
atgtcgggtttaagtaaaggatatggttttgtgaagtatgctgatattacaatggcaaac
aatgcaatcttggccatgaacggttatcgccttgagggtcgaacaattgcagtgagagtt
gctggtaagcctcctcagcctgttgtacctcctggaccaccggcatctgctgtgccaact
tatcctgttccaagtcagccacttggtgcatatccatcccaacagtatgctgccggtggc
cccattgggactgctcctcctgggagttacggtggtaccccagtgccatggggaccccct
gttcctcctccatatgctccctatgctcctcctccacctgggtcaactatgtatccacct
atgcaaggtcaacctatgcctccttatggggttcaatatccccctcctgtgccgactggc
cctcccggtgccccatcccagcctgcaacttctagtgaagtgcagcagagttaccctccc
ggagtgcagtctgacaacagtacctctactcagtctataccagctaatgtatatggtaat
tcgggacctccaatgccacctcaacctacatatcctgcatcttatggatatccaccttac
tataatgcagttcctccgccacctcccccttctgcccccatgcctgtttcaacttcagat
caatcccacaacattgcaaatgtgccttgggccagtaattctctagtcccacctcctgct
tcatcggcagacaatcaatcccagagcattggaaatgtgcctagggccgcaaatccatca
gtgcctcctcctgcttcatcagctgattcagagtatgaaaagttcatggcagagatgaaa
tga
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