Glycine soja (wild soybean): 114380048
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Entry
114380048 CDS
T06057
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114380048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114380048
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114380048
Complex C
U5 SnRNP specific factors
114380048
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Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
CFAP70_TPR_C
Y4kD_C
ubiquitin
PMC2NT
Motif
Other DBs
NCBI-GeneID:
114380048
NCBI-ProteinID:
XP_028194758
LinkDB
All DBs
Position
12:complement(40826140..40832355)
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AA seq
1041 aa
AA seq
DB search
MVFIVSPNHKTFSIDLNPNTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDD
SFLISDLGVGPYSTLTLHVPFLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR
SDIGPARAAPDLPDRSATTIGGTSGAGRGRGKPGEDEDDDEGEDKGYDENQKFDEFEGND
VGLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADL
KRRLYTLSPDDWQSLEKFESGGYSSRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKS
RAANGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKI
TSDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIQKGCEECPKN
EDVWLEACRLANPDEAKAVIARGVKSIPNSVKLWMQASKLENDDANRSRVLRKGLEHIPD
SVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLSK
EPAIWITAAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVVTC
QAIIHNTIGVGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWIKAAQ
LEKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSE
EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGL
KQFPSFFKLWLMLGQLEEQLAENAKRLDQPEKWLDHMNAAKKVYESGLRNCPNCVPLWLS
LANLEEEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGYKKEADILMAKALQECP
NSGILWAASIEMVPRPQRKTKSADAIKKCDHDPHVIAAVAKLFWLDRKVDKARTWLSRAV
TLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTES
ILKKVVVALGKEENAAENNKH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcgtgtcacccaatcacaaaaccttctccatagacctaaaccctaacacc
accactcttcatctcctcaaactcgctatacaacaaaccctaacccttccaatctcccac
cagcgcctcttcctctcccacagtcgccgattaaccgccgacaatgacggttccgacgat
tcctttcttatctccgatctcggcgtcggaccctactcaaccctaaccctccacgtcccc
ttcctcggcggcaccaaccctccggcggtgcccaaaccgcgcttcgacttcctcaactcc
aagccgcctccgaattacgtcgccggtctcggccgtggcgccaccggcttcaccacgcgg
tccgatatcggtccggcccgcgccgcgcccgatcttccggaccggtccgccaccaccatc
ggcggcacctccggcgccggacgtggccgcgggaagcccggggaggatgaggacgacgac
gagggcgaggacaagggatacgatgagaatcagaagtttgatgagttcgaagggaacgac
gtcggtttattcgcttcggcggaatacgatgaagatgacaaagaagcagatgcggtttgg
gaagcaattgataagaggatggattcgcggaggaaggataggagggaagcgaggttgaag
caggagattgagaaataccgcgcttcgaaccctaaaatcactgagcaattcgctgatttg
aagaggagattgtatactctttctcctgatgattggcagagtcttgagaagttcgagagt
ggggggtattcgtcgaggaacaagaagaagaggtttgagagttttgtgcctgtgcctgat
acacttttggagaaggcaaggcaagagcaagagcatgtgacagcattggatcctaagagt
agggctgctaatgggactgagactccttgggcacaaaccccggttactgatttgactgct
gttggtgagggtagaggaactgtgttgtctttgaagttggataggttgtcggattcggtt
tccgggatgaccaatgtcgatcctaaagggtacttgactgtgcttaatagtatgaagatt
actagtgatgctgagatttcggatttcaagaaggctaggttgctgctcaagagtgttacg
cagacgaatccgaagcacccaccgggttggattgcggctgcgaggctggaggagttggcg
gggaagctgcaggtggcaaggcagttgatacaaaaagggtgtgaggagtgtcccaaaaat
gaggatgtgtggctggaggcttgtaggctggcgaatccggatgaggcgaaggcggtgatt
gcgcggggtgtcaagtccattcccaattcggtgaagttgtggatgcaggcttcgaagttg
gagaatgatgatgcgaataggagtagggttttgaggaaggggttggagcacattcctgat
tctgttaggctgtggaaggctgttgtggagcttgctaatgaggaggatgctaggcttttg
cttcacagggctgtggagtgttgtcctttgcatgttgaactgtggcttgcgcttgcgagg
ttggagacttatgacaatgctaagaaggttcttaatagggcgagggagaggctgtccaag
gagccagctatatggataactgctgccaagttggaggaagctaatgggaatacttccatg
gttggcaagatcattgaaaggggtataagggctttgcagagagaaggtgtggtgattgat
agggaagcttggatgaaggaagcagaggcagctgagcgtgctgggtcggttgtaacttgc
caagcaataattcataatactattggggttggagttgaagaagaagataggaagaggaca
tgggttgctgatgctgaggaatgcaagaaaagaggttctattgagactgccagagctata
tatgctcatgccttgactgtcttcttaactaagaagagcatatggatcaaagcagcccag
ctggaaaagagtcatggtaccagggaatctcttgatgcattacttcgtaaagcagttacc
tacagaccacaggctgaagttctttggcttatgggtgccaaagagaagtggcttgctgga
gatgtgcctgcagctcgtgctatcctccaagaagcttatgctgccattcccaattctgag
gaaatatggcttgctgctttcaagctagaatttgaaaaccatgaacctgagagagctagg
atgctgttggctaaagccagagagagaggaggtacagaaagagtctggatgaaatcagca
attgtggagagagaactggggaacattgaagaggagaggagattgttagatgaaggtctg
aagcaattcccttcattctttaaattgtggttgatgcttggccagctggaggaacagctt
gctgagaatgcaaagaggcttgatcagcctgaaaagtggcttgatcacatgaatgcagct
aagaaagtctacgaatctggattgagaaactgtcctaattgcgtaccactttggctctct
cttgctaatcttgaagaggagatgaatggactgagtaaagcacgtgcagttctcacaatg
gctcgcaagaagaatcctcaaaaccctgaactctggcttgctgctgttagagcggaattg
aagcatggatataagaaagaagctgatattttgatggcaaaagcattgcaggagtgtcct
aacagtggtattctgtgggcagcatcaattgagatggttcctcgtccccaacgtaaaacc
aagagcgcggatgccatcaagaaatgtgaccatgatccccatgttattgctgctgtggcc
aaattattttggcttgataggaaggtggacaaagccaggacttggttgagtagggctgtg
acactagcgcctgatattggggatttctgggcattgttatacaaatttgaactgcagcat
ggaacagaggagaaccagaaggatgtactgaagagatgtattgctgctgaaccaaaacat
ggagagaaatggcaagcaatctcaaaggctgttgagaattctcatcaaccaacagaatcc
atcttgaagaaagtagtggttgcacttgggaaagaagagaatgcggctgagaataataaa
cattga
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