Glycine soja (wild soybean): 114380097
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Entry
114380097 CDS
T06057
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114380097
03036 Chromosome and associated proteins [BR:
gsj03036
]
114380097
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114380097
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
114380097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
xRRM
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
114380097
NCBI-ProteinID:
XP_028194826
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All DBs
Position
12:36227811..36244955
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AA seq
837 aa
AA seq
DB search
MEQNLNLTAEAMSDSDERMKETLALSSEAERDRDKSMSDSDSEDEAQQNLQIESLQTELV
TNPSNYDAHLQYIRLLRRMGDVDKLSRAREAMSELFPLSPTMWRQWIKDELSLNTAARPE
AFSRILKLYERGVFDYLSVSLWCDYINFVQEFDPMVRQFSPTGISKARDLFESALTAAGL
HVAEGSKIWEAYKKYEQDILLTFDDTDEQAKEKQVQRIRSLFHRQLSVPLAGMSSTITAY
KTWEMEQGSLQDVESIDLVDIYPHVAASYQKALEMYNARFHLEEQILSPNISDSERLQHY
MNYLKFEQSSGMPARIQVLYERAITDFPITPDLWLDCTRNLDNTLKVGNIVSNVYSRATK
NCPWVGELWVRYMLSLERGHASEKDLSEIFEKSLLCTFSTLDEYLDLFLTRVDGLRRRMA
SSSEEDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLGKDITAARGVWEN
CLKLCGSMLESWTGYIAMEVELGHINEARSIYKRCYSKRFSGTGSEDICQSWLRFEREFG
KLEDFDHALHKVTPRMDELKLFRMQQESKSAEESEKNTKRNAREKRKLGSDITEEQSPSK
RFRDVGNPKKAPEENKYHVQNISQVTKVEGVNWKNTKIDDNPSEQQFSYEKNRGYSDQCT
AFLSNLHPTANYEHIRNFFSDVGGIVAIRILHDKFTGKSRGLAYVDFLDEEHLAAAIAKN
RLKLIGKKLSIARSDPKRGGRESSNPKTLTEHADATNHSSQKASGSKETDDTYKGDVKDV
KFSSRKPGNDNIQLKGKNTFAVPRNVRPLGFTTNKPKAEEGDEKPKSNEEFRKIFIR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacctaaacctgaccgcagaagccatgtctgattccgacgagaggatgaag
gaaaccctagccctgtcctcagaagcagagcgtgacagagacaaatccatgtctgattct
gattctgaggacgaagctcagcagaacctccaaatcgaatctctacagaccgagcttgtt
actaacccctctaactacgatgctcatttgcaatatatacggcttctgaggagaatgggt
gatgttgataaactgtcaagagccagggaagctatgagtgaactctttccgttgagccct
acaatgtggcgtcaatggatcaaagatgagctttctctcaacactgctgctcgacccgag
gctttctctagaattctgaagctttacgaacgaggggtgtttgattatctgtctgtctca
ctttggtgtgactacattaattttgtacaagagtttgatccaatggtacgccaattttca
cctactggtatttctaaggcaagggatctgtttgagagtgcccttactgcagctggtctg
catgttgctgaaggcagtaaaatatgggaagcatacaagaaatatgagcaggacatactt
ttaaccttcgatgatactgatgaacaggccaaagaaaagcaagttcaacgcattcgtagt
ttattccaccgccagttgtctgttccccttgctggtatgagttcaacaattactgcctat
aagacttgggagatggaacaaggaagtcttcaagatgttgaatccattgatttggttgat
atttatcctcatgttgcggcttcataccagaaggccttggagatgtataatgctcgtttt
catcttgaagaacagattttgagcccgaatatttcagattcagaaagattacaacactac
atgaactatttgaaatttgagcagtcttctggaatgccagccagaattcaagttctatat
gaacgagccattactgactttcctataacacctgatctctggctggattgtactcgcaat
ttggacaacactttgaaggttggtaatattgtcagcaatgtttattctagggcaactaag
aactgcccttgggttggagaactttgggttcgatatatgctttcgttggagcgtggtcat
gcttcggagaaagacttgtctgaaatctttgagaagtccctgctgtgtaccttttcaact
cttgacgagtatcttgatttgtttcttacccgggtagatggcttaaggcgaagaatggca
tccagcagtgaagaggatttggaatataaaataatacgggagacctttcagcgtgcatcg
gattatctgtcgccttacttgaagaatacagagggtttgctacatttacatgcttattgg
gctcgtttagaaacaaaacttgggaaagatataactgcagctcgtggagtttgggagaat
tgtcttaagctatgtggttcaatgttggagtcatggactggttatatagcaatggaagtg
gaattaggtcacataaatgaagcaaggtccatatacaagagatgctacagtaaaagattt
tctggaactggttcagaggacatatgccagtcatggttacgctttgagagggaatttggc
aagttggaagattttgatcatgcattacacaaggttacccctcggatggatgagctgaag
ttatttaggatgcagcaggaatccaagtcagcagaggaaagtgaaaagaatactaagaga
aatgctcgtgaaaagagaaagctgggatcagatataactgaagaacagtctccatcaaag
cgatttagagatgttggaaatccaaagaaagcacctgaggagaataaatatcatgtgcag
aacatttctcaggtgacaaaagtggaaggggtcaattggaagaatactaaaattgatgat
aatcccagtgagcaacagtttagctacgaaaagaacaggggatactctgaccagtgcacc
gcatttttatcaaatcttcatcctacggcaaactatgaacatattcgtaatttcttcagt
gatgttggtggaattgttgccatccgcatcctacatgataaattcactggaaaatcaagg
ggactagcatatgtggactttttggatgaagaacaccttgctgctgcaatagctaagaac
aggctaaagttaattggaaagaaactaagtattgctcgatctgacccaaagcgaggcgga
agggaatcttctaatccaaaaacattgacagaacatgcagatgccactaatcattctagt
caaaaggcttccggatccaaagaaaccgatgatacttacaagggagatgtaaaggatgtg
aagttctcttctagaaagccaggaaatgataacatccagcttaaagggaagaatactttt
gccgtgcctagaaatgtcagaccacttggttttactacaaataaaccaaaagcagaagag
ggggatgaaaagccaaaatctaatgaggaattcagaaagatattcattcgttaa
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