Glycine soja (wild soybean): 114380149
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Entry
114380149 CDS
T06057
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00100
Steroid biosynthesis
gsj00909
Sesquiterpenoid and triterpenoid biosynthesis
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
114380149
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
114380149
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gsj01006
]
114380149
Enzymes [BR:
gsj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
114380149
Prenyltransferases [BR:
gsj01006
]
Terpene biosynthesis
Squalene/phytoene synthase
114380149
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
114380149
NCBI-ProteinID:
XP_028194895
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Position
12:complement(2799954..2806090)
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AA seq
413 aa
AA seq
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MGSLGAILKHPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGI
ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD
QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSEYVNKL
EDLKYEENSVKAVQCLNDMVTNALMHAEDCLKYMAALRDPPIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFASMLEPKVDKNDPNATKTLSRL
EAIQKTCRESGLLSKRKSYIVNDESGYGSTMIVILVIMVSIIFAYLSANHHNS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttgggagcgattctgaaacatccagatgacttttaccctctactgaagctg
aaaatggcggcgaggaacgccgagaagcagatcccgccggagccgcactgggcgttctgc
tacacaatgctccacaaggtttctcgaagtttcgccctcgtcattcagcaactcggcatc
gagcttcgcaacgccgtttgcatattttatttggttctgcgagctctcgacaccgttgag
gatgatactagcatagaaacagatgtcaaggtgccaatactgatagcctttcaccgtcat
atttatgatcgtgattggcacttttcatgtggcacaaaggagtacaaagttctaatggac
cagtttcatcatgtttcaactgcttttctggaacttggaaagaactaccaggaagcaatt
gaggacattaccaaaagaatgggtgctggaatggccaaatttatttgcaaggaggtagaa
acaattgatgactatgatgaatattgtcactatgtggcaggacttgttgggctgggttta
tcaaagcttttccatgcgtctggttcagaagatctggctccagatgacctttccaattca
atgggcttgtttctacagaaaacaaacattattcgagattatctggaagacatcaatgag
atccccaagtcacgcatgttttggccacgacagatttggagtgaatatgttaacaaactt
gaggatttgaaatatgaggagaactctgttaaggcagtgcaatgcttaaatgacatggtc
actaatgctctgatgcatgctgaagattgcttaaaatacatggctgctttacgtgacccg
cctatatttcgcttttgtgctataccccagataatggcaattggaacacttgcattatgc
tacaacaacattgaggtcttcagaggtgtagttaaaatgaggcgaggtttaactgccaaa
gtgattgaccgaacaaagactatggctgatgtctacggtgctttttttgattttgcttct
atgttagagcccaaggttgacaaaaacgatcccaatgcaacaaaaacattgagcaggctg
gaagctatacagaaaacttgcagagaatctggtctcttaagtaaaaggaaatcttacatt
gtgaatgatgaaagtggatatggctcaaccatgattgtcatattggtcatcatggtttcc
atcatttttgcttatctgtctgctaaccaccataatagctag
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